RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 GGT7Q9UJ14 662 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 GARTP22102 1010 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 IFNA8P32881 189 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 FOXD4Q12950 439 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 SCFD1Q8WVM8 642 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 RNF103-CHMP3A0A140T963 221 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 CYBBP04839 570 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 MCF2P10911 925 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 ALDH18A1P54886 795 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 DCAF6Q58WW2 860 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 AP1ARQ63HQ0 302 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 PCMTD2Q9NV79 361 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 CCDC78A2IDD5 438 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 CYP2C8P10632 490 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 MAP3K7CLP57077 242 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 PCNX4Q63HM2 1172 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 C4orf22Q6V702 233 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 PPIL6Q8IXY8 311 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 ARHGEF38Q9NXL2 777 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 AIPL1Q9NZN9 384 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 ZC3H4Q9UPT8 1303 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 KBTBD13C9JR72 458 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 SLC26A7Q8TE54 656 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 PTPRN2Q92932 1015 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 SPATA31D1Q6ZQQ2 1576 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 GFAPP14136 432 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 KCNA1Q09470 495 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 DPP3Q9NY33 737 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF212Q9UDV6 495 aa13.92□□□□□ -0.18
CACNA1C-222ENST00000406454 AARSP49588 968 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 CPT1AP50416 773 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 TSPAN17Q96FV3 270 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM129AQ9BZQ8 928 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 LSM7Q9UK45 103 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SERPINB4P48594 390 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 PDCD2LQ9BRP1 358 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 MST1RQ04912 1400 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 TMEM120BA0PK00 339 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 PSTPIP1O43586 416 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 DNAJC6O75061 913 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 MYO1DO94832 1006 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SHMT1P34896 483 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 PGM1P36871 562 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 RAD23BP54727 409 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 HUNKP57058 714 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF720Q7Z2F6 126 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 RIBC1Q8N443 379 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 CAPN6Q9Y6Q1 641 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SPRP35270 261 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 ST3GAL1Q11201 340 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 TRADDQ15628 312 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SZRD1Q7Z422 152 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM71DQ8N9W8 422 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 ELMO2Q96JJ3 720 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 HIC1Q14526 733 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 SEPT5Q99719 369 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 TRPC7Q9HCX4 862 aa13.91□□□□□ -0.18
CACNA1C-222ENST00000406454 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 ANO5Q75V66 913 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 PPP1R2P1Q96PQ5 205 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 KLF6Q99612 283 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 NSMCE4AQ9NXX6 385 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 NFIBO00712 420 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 ATICP31939 592 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 PDAP1Q13442 181 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 TMEM259Q4ZIN3 620 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 ACSF2Q96CM8 615 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF197O14709 1029 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 POLBP06746 335 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 CYP11B1P15538 503 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 PRLRP16471 622 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 KDSRQ06136 332 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 LAMB3Q13751 1172 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 GNASQ5JWF2 1037 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 CASKIN2Q8WXE0 1202 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 PXMP2Q9NR77 195 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 PFDN1O60925 122 aa13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 ENO1P06733 434 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms