RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NDST3O95803 873 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 PLATP00750 562 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 RPL17P18621 184 aaKnown RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 TOB1P50616 345 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 RABGGTBP53611 331 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ITGA8P53708 1063 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 MC2RQ01718 297 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 TNFAIP2Q03169 654 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 RAB32Q13637 225 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 STARD3Q14849 445 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 SURF1Q15526 300 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 DGKKQ5KSL6 1271 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 CIR1Q86X95 450 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF280BQ86YH2 543 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 CFAP52Q8N1V2 620 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ANKRD42Q8N9B4 389 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZSCAN18Q8TBC5 510 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF566Q969W8 418 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 EVI5LQ96CN4 794 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 IQCDQ96DY2 449 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 SLC46A1Q96NT5 459 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYO1AQ9UBC5 1043 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 CEP83Q9Y592 693 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 PCDHGB3Q9Y5G1 929 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 SLC30A1Q9Y6M5 507 aa4.7□□□□□ -1.66
HMGB1P17-201ENST00000403495 DBX1A6NMT0 343 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 H7C4K7 107 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYO1CO00159 1063 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 RAB27BO00194 218 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 POLRMTO00411 1230 aaKnown RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 CKBP12277 381 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYL4P12829 197 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 FDXRP22570 491 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 EEF1GP26641 437 aaKnown RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 TECP42680 631 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 SCNN1GP51170 649 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 HSD11B2P80365 405 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 BTKQ06187 659 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM102AQ5T9C2 384 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 TAPT1Q6NXT6 567 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 TAF2Q6P1X5 1199 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 Q6ZSN1 163 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 RNF44Q7L0R7 432 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 PPP1R32Q7Z5V6 425 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 KCTD20Q7Z5Y7 419 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 SYTL1Q8IYJ3 562 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 DNERQ8NFT8 737 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 IPO4Q8TEX9 1081 aaKnown RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 MIEF2Q96C03 454 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 MNTQ99583 582 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 SPATA5L1Q9BVQ7 753 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 SSBP3Q9BWW4 388 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 GPR87Q9BY21 358 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 ETAA1Q9NY74 926 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 PADI4Q9UM07 663 aa4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 MAGED2Q9UNF1 606 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P17-201ENST00000403495 A0A087WZ62 844 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM234BA2RU67 622 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 THP07101 528 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 TXNP10599 105 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ACO1P21399 889 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 FGFR4P22455 802 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 GCSHP23434 173 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF134P52741 427 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 LILRA4P59901 499 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 POU6F2P78424 691 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ICAM4Q14773 271 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZRSR2Q15696 482 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 PDCD4Q53EL6 469 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 SLC44A4Q53GD3 710 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM160B1Q5W0V3 765 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 DRICH1Q6PGQ1 229 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 GLB1LQ6UWU2 654 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 POLNQ7Z5Q5 900 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 GSPT2Q8IYD1 628 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYCT1Q8N699 235 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 PSD4Q8NDX1 1056 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 Q8TCH9 128 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF483Q8TF39 744 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 NUP133Q8WUM0 1156 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 BRI3BPQ8WY22 251 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 MUL1Q969V5 352 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 TRIB1Q96RU8 372 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 MPHOSPH9Q99550 1183 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 SMOQ99835 787 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 CNPPD1Q9BV87 410 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 A1CFQ9NQ94 594 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM30AQ9NZY2 134 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 HESX1Q9UBX0 185 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF212Q9UDV6 495 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 EIF2B4Q9UI10 523 aaKnown RBP4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 SLC39A10Q9ULF5 831 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 SORCS3Q9UPU3 1222 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms