RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 YDJCA8MPS7 323 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 HAUS5O94927 633 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 SCTRP47872 440 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 ARFIP2P53365 341 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 PSMD6Q15008 389 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 PACS2Q86VP3 889 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 RASGEF1CQ8N431 466 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
USP48-204ENST00000400301 FZD1Q9UP38 647 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 TBC1D12O60347 775 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 APRTP07741 180 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 ADORA2BP29275 332 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 PPATQ06203 517 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 NFIL3Q16649 462 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 TTC39CQ8N584 583 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 ERVK-5Q9HDB9 667 aa19.5■□□□□ 0.71
USP48-204ENST00000400301 GYG2O15488 501 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 TMEM132DQ14C87 1099 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 ARMCX2Q7L311 632 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 RIBC1Q8N443 379 aaPredicted RBP19.49■□□□□ 0.71
USP48-204ENST00000400301 ERP27Q96DN0 273 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 PCDHB18PQ96TA0 734 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 DOT1LQ8TEK3 1739 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 TXNDC9O14530 226 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 HSD17B4P51659 736 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 RBP5P82980 135 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 C1QBPQ07021 282 aaKnown RBP19.49■□□□□ 0.71
USP48-204ENST00000400301 BZW1Q7L1Q6 419 aaKnown RBP19.49■□□□□ 0.71
USP48-204ENST00000400301 FAM71DQ8N9W8 422 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 KREMEN1Q96MU8 473 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 CFAP69A5D8W1 941 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 CLCN3P51790 818 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 CYB5D1Q6P9G0 228 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 CRLF3Q8IUI8 442 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 TMEM121Q9BTD3 319 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 PCYOX1Q9UHG3 505 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 USH1CQ9Y6N9 552 aa19.49■□□□□ 0.71
USP48-204ENST00000400301 TJP1Q07157 1748 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 ITGB3P05106 788 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 CYP1A2P05177 515 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 CNTN2Q02246 1040 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 SMAD1Q15797 465 aaKnown RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 TFDP3Q5H9I0 405 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 HEATR6Q6AI08 1181 aaKnown RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 NXNQ6DKJ4 435 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 RAPH1Q70E73 1250 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 ANO5Q75V66 913 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 ZNF572Q7Z3I7 529 aaPredicted RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 GABPB2Q8TAK5 448 aaPredicted RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 FBXO41Q8TF61 875 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 SEMA4DQ92854 862 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 ASB14A6NK59 587 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 KCNV2Q8TDN2 545 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 NEUROG2Q9H2A3 272 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 MYH8P13535 1937 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 APOL1O14791 398 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 DDX3YO15523 660 aaKnown RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 LUC7L3O95232 432 aaKnown RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 PSMC4P43686 418 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 MMP14P50281 582 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 DRG2P55039 364 aaKnown RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 UBXN6Q9BZV1 441 aa19.48■□□□□ 0.71
USP48-204ENST00000400301 PRMT7Q9NVM4 692 aaPredicted RBP19.48■□□□□ 0.71
USP48-204ENST00000400301 PLA2G6O60733 806 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 IL18RAPO95256 599 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 SPOCD1Q6ZMY3 1216 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 NPHS2Q9NP85 383 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 SMYD2Q9NRG4 433 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 COG5Q9UP83 839 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 CCDC195A0A1B0GUA6 201 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 HBP1O60381 514 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 MRPS9P82933 396 aaKnown RBP19.47■□□□□ 0.71
USP48-204ENST00000400301 C12orf56Q8IXR9 622 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 PPIL6Q8IXY8 311 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 EMC1Q8N766 993 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 NAALADL1Q9UQQ1 740 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 MYH13Q9UKX3 1938 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 ASAP2O43150 1006 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 KITP10721 976 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 LVRNQ6Q4G3 990 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 SIAH1Q8IUQ4 282 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 RSAD1Q9HA92 442 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 FAM49BQ9NUQ9 324 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 DMAC2Q9NW81 257 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 NR2E1Q9Y466 385 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 PGK2P07205 417 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 OTUD4Q01804 1114 aaKnown RBP19.47■□□□□ 0.71
USP48-204ENST00000400301 MCL1Q07820 350 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 AP5M1Q9H0R1 490 aa19.47■□□□□ 0.71
USP48-204ENST00000400301 HUS1O60921 280 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 LYPLA2O95372 231 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 NCKAP1LP55160 1127 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 PLCB4Q15147 1175 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 MFSD7Q6UXD7 560 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 CDKL3Q8IVW4 592 aaPredicted RBP19.46■□□□□ 0.71
USP48-204ENST00000400301 HPDLQ96IR7 371 aa19.46■□□□□ 0.71
USP48-204ENST00000400301 CD248Q9HCU0 757 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms