RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 PIK3R2O00459 728 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 FTCDO95954 541 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 PDGFRAP16234 1089 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 PRCPP42785 496 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 SLC27A1Q6PCB7 646 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 PATL1Q86TB9 770 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 NCLNQ969V3 563 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 RIPOR3Q96MK2 946 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 ZNF521Q96K83 1311 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 HLA-DRAP01903 254 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 FTLP02792 175 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 CYP2A6P11509 494 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 CYP11B2P19099 503 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 PPP3CCP48454 512 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 BCAT1P54687 386 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 LINC00523Q86TU6 105 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 KIRREL3Q8IZU9 778 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 VPS50Q96JG6 964 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 HDAC6Q9UBN7 1215 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MRPS17Q9Y2R5 130 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 TTLL9Q3SXZ7 439 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 OVOS1Q6IE37 1185 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 ELOA2Q8IYF1 753 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 SERPINI1Q99574 410 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 TSR3Q9UJK0 312 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 SF3B1O75533 1304 aaKnown RBP eCLIP8.33□□□□□ -1.089e-7■■■■■ 47.8
USP47-203ENST00000399455 KANSL1LA0AUZ9 987 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 ARIH2O95376 493 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MYBP10242 640 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 POLR2EP19388 210 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 ARHGAP25P42331 645 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 PLTPP55058 493 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 NFIAQ12857 509 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 PRKAA1Q13131 559 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 LRRC43Q8N309 656 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MSL3Q8N5Y2 521 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 GLMNQ92990 594 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 GTSE1Q9NYZ3 720 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 AIPL1Q9NZN9 384 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 RRP9O43818 475 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 INSRRP14616 1297 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 LAG3P18627 525 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 GRK3P35626 688 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 CCT5P48643 541 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 TRADDQ15628 312 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 TTC31Q49AM3 519 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.088e-7■■■□□ 14.9
USP47-203ENST00000399455 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 SAYSD1Q9NPB0 183 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 VPS28Q9UK41 221 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 CCDC188H7C350 402 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MSH4O15457 936 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MGEA5O60502 916 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 POMCP01189 267 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 ADCYAP1R1P41586 468 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 EIF3EP60228 445 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 TP53BP2Q13625 1128 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 LRRC8AQ8IWT6 810 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 RPRD1AQ96P16 312 aaPredicted RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 MRPL40Q9NQ50 206 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 SAMSN1Q9NSI8 373 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MROH1Q8NDA8 1641 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 ATP5BP06576 529 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 HMOX2P30519 316 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MTFR1Q15390 333 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 GLRA4Q5JXX5 417 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 MMS22LQ6ZRQ5 1243 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 PHACTR4Q8IZ21 702 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 CPA6Q8N4T0 437 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
USP47-203ENST00000399455 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 IGDCC4Q8TDY8 1250 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 CCDC3Q9BQI4 270 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 STK33Q9BYT3 514 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 L3MBTL1Q9Y468 752 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 SLIT3O75094 1523 aa8.33□□□□□ -1.08
USP47-203ENST00000399455 COPEO14579 308 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 TRIM49P0CI25 452 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 TRIM49CP0CI26 452 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 BEX3Q00994 111 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 UGP2Q16851 508 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 DPCR1Q3MIW9 517 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 ZRANB3Q5FWF4 1079 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 CRLF3Q8IUI8 442 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 WDR49Q8IV35 697 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FBXO10Q9UK96 956 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CASZ1Q86V15 1759 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 A0A087WWV3 80 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms