RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CUL4BQ13620 913 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 IL17AQ16552 155 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC35G1Q2M3R5 365 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 FBXO38Q6PIJ6 1188 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTHFD1LQ6UB35 978 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 CHRDL2Q6WN34 429 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 FKBP9P1Q75LS8 142 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 ANKK1Q8NFD2 765 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 CTCFLQ8NI51 663 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 ADAMTS15Q8TE58 950 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 C7orf26Q96N11 449 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 CHRDQ9H2X0 955 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 DZANK1Q9NVP4 752 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 SCAF8Q9UPN6 1271 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC12A8A0AV02 714 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CUTAO60888 179 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TBCAO75347 108 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 STAMBPO95630 424 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CFHP08603 1231 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 KRT2P35908 639 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 HSD17B2P37059 387 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MAPK10P53779 464 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SNAP25P60880 206 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PSMA6P60900 246 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 DSG1Q02413 1049 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 RELQ04864 619 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC15A2Q16348 729 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 KMT5BQ4FZB7 885 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TTC38Q5R3I4 469 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TTBK2Q6IQ55 1244 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 DARS2Q6PI48 645 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SARM1Q6SZW1 724 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TPTE2Q6XPS3 522 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SAMD7Q7Z3H4 446 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 LINC00469Q8N7U9 141 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 FLAD1Q8NFF5 587 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TNIP2Q8NFZ5 429 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SEPT1Q8WYJ6 367 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PTP4A1Q93096 173 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 VPS39Q96JC1 886 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MROH8Q9H579 483 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ETNK1Q9HBU6 452 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 STK32BQ9NY57 414 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PCDHB5Q9Y5E4 795 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 LAMB2P55268 1798 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CASZ1Q86V15 1759 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MYH2Q9UKX2 1941 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 A0A0B4J269 797 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACTN4O43707 911 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PTP4A3O75365 173 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZNF254O75437 659 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 UFL1O94874 794 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 GNG11P61952 73 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TPM4P67936 248 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MRPS25P82663 173 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 BEX3Q00994 111 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 DOK7Q18PE1 504 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 GBP6Q6ZN66 633 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CARD6Q9BX69 1037 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CNTD2Q9H8S5 307 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 IL17RBQ9NRM6 502 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ADD3Q9UEY8 706 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PTBP2Q9UKA9 531 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 PCDHGB4Q9UN71 923 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 BCS1LQ9Y276 419 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CENPFP49454 3210 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 UBE2CO00762 179 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ENC1O14682 589 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SMPD2O60906 423 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SOAT2O75908 522 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SNRNP70P08621 437 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 HSPA1AP0DMV8 641 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 HSPA1BP0DMV9 641 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CTSSP25774 331 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 GRIA2P42262 883 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 IKBKEQ14164 716 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 LRRC32Q14392 662 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 NPY5RQ15761 445 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TEX35Q5T0J7 233 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 RRAGBQ5VZM2 374 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 ARHGAP11AQ6P4F7 1023 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 INTS8Q75QN2 995 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTERF4Q7Z6M4 381 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRIM74Q86UV6 250 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRIM73Q86UV7 250 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MS4A3Q96HJ5 214 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 CCDC74BQ96LY2 380 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 RUNDC3BQ96NL0 473 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTRQ99707 1265 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 RNF41Q9H4P4 317 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SIRT5Q9NXA8 310 aa6.63□□□□□ -1.35
TRAPPC13-202ENST00000399438 SPEF2Q9C093 1822 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms