RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ASS1P00966 412 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 EPS8Q12929 822 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 GRM4Q14833 912 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 KNOP1Q1ED39 458 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 NLRP10Q86W26 655 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 IQCF2Q8IXL9 164 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 LRRC34Q8IZ02 419 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 RIBC1Q8N443 379 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 RSPH1Q8WYR4 309 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 GIN1Q9NXP7 522 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 SLC12A4Q9UP95 1085 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PPP2R3BQ9Y5P8 575 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 H7C0C1 242 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 MTSS1O43312 755 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 LPXNO60711 386 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 SOX5P35711 763 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ATP5OP48047 213 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 STX5Q13190 355 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ZNF211Q13398 564 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ERICH5Q6P6B1 374 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 POLNQ7Z5Q5 900 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 FBXO11Q86XK2 927 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 SCG3Q8WXD2 468 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ZC3H10Q96K80 434 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 NACC1Q96RE7 527 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 MOV10Q9HCE1 1003 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 APPL1Q9UKG1 709 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 NOS1APO75052 506 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 TTLL1O95922 423 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 HSMCR30P0CW71 290 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 CD19P15391 556 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 SLC34A1Q06495 639 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 WASHC2DQ5SRD0 308 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 USP49Q70CQ1 688 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 MARK2Q7KZI7 788 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 CCDC60Q8IWA6 550 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 EIF1ADQ8N9N8 165 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PHC3Q8NDX5 983 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 TRIM51Q9BSJ1 452 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 FOXP3Q9BZS1 431 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 CLIC5Q9NZA1 410 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.81
SMAD9-203ENST00000399275 PCDHA1Q9Y5I3 950 aa10.02□□□□□ -0.81
SMAD9-203ENST00000399275 CCDC195A0A1B0GUA6 201 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 DDX39AO00148 427 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SNX2O60749 519 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CFBP00751 764 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PRKACAP17612 351 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CSE1LP55060 971 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 BTN3A2P78410 334 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 TRIP4Q15650 581 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SPANXN2Q5MJ10 180 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 TRIQKQ629K1 86 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CD302Q8IX05 232 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SUPT20HQ8NEM7 779 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 COX4I2Q96KJ9 171 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SERPINB12Q96P63 405 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PABPC3Q9H361 631 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 RNF103O00237 685 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PHGDHO43175 533 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 AKAP5P24588 427 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CHKAP35790 457 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 SLC9A3P48764 834 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 DDB1Q16531 1140 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CRELD2Q6UXH1 353 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 JAMLQ86YT9 394 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 LRRC47Q8N1G4 583 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 DRAXINQ8NBI3 349 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 FAM213AQ9BRX8 229 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PTPRUQ92729 1446 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 TMEM120BA0PK00 339 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CLRN2A0PK11 232 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 FAM47DPA6NHR8 397 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 CES2O00748 559 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 FKBP6O75344 327 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 APOL3O95236 402 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 TCF3P15923 654 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 USP46P62068 366 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PDZK1Q5T2W1 519 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 FAM102BQ5T8I3 360 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 TMC4Q7Z404 712 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 RFX6Q8HWS3 928 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 DEPDC1BQ8WUY9 529 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 RNF34Q969K3 372 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 C6orf62Q9GZU0 229 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-203ENST00000399275 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
SMAD9-203ENST00000399275 PP2D1A8MPX8 630 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms