RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 AGPAT1Q99943 283 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 BPIFA3Q9BQP9 254 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RIC8BQ9NVN3 520 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 PRDM15P57071 1507 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 C16orf96A6NNT2 1141 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RGS7P49802 495 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 PPP2R2AP63151 447 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 CUL3Q13618 768 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 FGD2Q7Z6J4 655 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 TRIM69Q86WT6 500 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RUBCNQ92622 972 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 DSEQ9UL01 958 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 ALDH6A1Q02252 535 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 MMGT1Q8N4V1 131 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 FER1L4A9Z1Z3 1794 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 CHI3L1P36222 383 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 SERPINB9P50453 376 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 POU4F1Q01851 419 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 NCAPHQ15003 741 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RASSF9O75901 435 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 USP10Q14694 798 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 ADCK1Q86TW2 530 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 GEMIN8Q9NWZ8 242 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 APEX2Q9UBZ4 518 aa12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-206ENST00000399273 TCHHQ07283 1943 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 F5H5T6 163 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 H7C1W4 665 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 SNRNP35Q16560 246 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 ITIH5Q86UX2 942 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 LNPEPQ9UIQ6 1025 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 H0Y3Z8 333 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CSE1LP55060 971 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 EPHB3P54753 998 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 DDX42Q86XP3 938 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 RPS6KB2Q9UBS0 482 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 PRKCEQ02156 737 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 STAT4Q14765 748 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 MFSD1Q9H3U5 465 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 MUTP22033 750 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 GTF2E2P29084 291 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 UBE3AQ05086 875 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 AHCYL2Q96HN2 611 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 WWOXQ9NZC7 414 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 TRMT6Q9UJA5 497 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 ATP6V1C1P21283 382 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 ETFBP38117 255 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 IPMKQ8NFU5 416 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 MYH3P11055 1940 aa12.11□□□□□ -0.47
CCDC144A-206ENST00000399273 CHRM3P20309 590 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 MRPS15P82914 257 aaKnown RBP12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 SLFNL1Q499Z3 407 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 C1orf54Q8WWF1 131 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 CYP26A1O43174 497 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 ALDH18A1P54886 795 aaKnown RBP12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 TBC1D10CQ8IV04 446 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 ARMC2Q8NEN0 867 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
CCDC144A-206ENST00000399273 ADCY3O60266 1144 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms