RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MAN1B1Q9UKM7 699 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SLC27A5Q9Y2P5 690 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DENND4AQ7Z401 1863 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MTMR11A4FU01 709 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 DCXO43602 365 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 HCRTO43612 131 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 XYLBO75191 536 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 LRG1P02750 347 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ASGR2P07307 311 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 BMP6P22004 513 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PMS1P54277 932 aaKnown RBP15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CLDN10P78369 228 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CAMK4Q16566 473 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 NFIL3Q16649 462 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TDRD10Q5VZ19 366 aaKnown RBP15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 GET4Q7L5D6 327 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 OTOP3Q7RTS5 596 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 THEM5Q8N1Q8 247 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MYADMQ96S97 322 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ZCWPW1Q9H0M4 648 aa15.14■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TRIM49BA6NDI0 452 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 BIN1O00499 593 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 SOAT2O75908 522 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 C4BPAP04003 597 aaKnown RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ACAT1P24752 427 aaKnown RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MYL6P60660 151 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TWF1Q12792 350 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 BIRC3Q13489 604 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 COBLL1Q53SF7 1204 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 C1orf220Q5T0J3 134 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 RTL10Q7L3V2 364 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ADSSL1Q8N142 457 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ST13P5Q8NFI4 369 aaPredicted RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ACSF2Q96CM8 615 aaPredicted RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 DDX43Q9NXZ2 648 aaKnown RBP15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CEP72Q9P209 647 aa15.13■□□□□ 0.01
HLA-DQB1-202ENST00000399079 FAM86C2PA6NEL3 165 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PHACTR2O75167 634 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ALADP13716 330 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 FSHRP23945 695 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 RPL13P26373 211 aaKnown RBP15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TRPC3Q13507 836 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CCDC142Q17RM4 750 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 EDRF1Q3B7T1 1238 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PABPC1LQ4VXU2 614 aaKnown RBP15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ANKRD40Q6AI12 368 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 FAM186BQ8IYM0 893 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ZDHHC14Q8IZN3 488 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TMEM86AQ8N2M4 240 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ITFG1Q8TB96 612 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 KBTBD7Q8WVZ9 684 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 XYLT2Q9H1B5 865 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 C11orf16Q9NQ32 467 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TMLHEQ9NVH6 421 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 YIPF1Q9Y548 306 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 GABRDO14764 452 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MAPK13O15264 365 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 VNN1O95497 513 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 RHOP08100 348 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 POU2F2P09086 479 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TRIM49P0CI25 452 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 TRIM49CP0CI26 452 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 LMO2P25791 158 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PSMC2P35998 433 aaKnown RBP15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 VAMP7P51809 220 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 SLC5A9Q2M3M2 681 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 SV2AQ7L0J3 742 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 LIMS2Q7Z4I7 341 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 SMOC2Q9H3U7 446 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MAFFQ9ULX9 164 aa15.12■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MYO10Q9HD67 2058 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 NOTCH4Q99466 2003 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 NRG2O14511 850 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 IKBKBO14920 756 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 LAMP2P13473 410 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PTPN2P17706 415 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 AP3M2P53677 418 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 NCOA4Q13772 614 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 MORC3Q14149 939 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 PTPN21Q16825 1174 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 ZACNQ401N2 412 aa15.11■□□□□ 0.01
HLA-DQB1-202ENST00000399079 INTS8Q75QN2 995 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms