RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CDC42EP5Q6NZY7 148 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 MTHFD1LQ6UB35 978 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 FBXO36Q8NEA4 188 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 KRT35Q92764 455 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 INPP5DQ92835 1189 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 MXRA8Q9BRK3 442 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 NINJ2Q9NZG7 142 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 PAIP2BQ9ULR5 123 aaKnown RBP11.58□□□□□ -0.56
HPS4-202ENST00000398145 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 GSTA4O15217 222 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 PAMP19021 973 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 POU5F1BQ06416 359 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 SLC12A1Q13621 1099 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
HPS4-202ENST00000398145 PLA2G4FQ68DD2 849 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 DUPD1Q68J44 220 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 IRGCQ6NXR0 463 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 PID1Q7Z2X4 250 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 MYLK2Q9H1R3 596 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 CDY2AQ9Y6F7 541 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 CDY1Q9Y6F8 540 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 NEMP1O14524 444 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 FKBP6O75344 327 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 ADRA2BP18089 450 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 MUTP22033 750 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 MCL1Q07820 350 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 FUT2Q10981 343 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 QPCTQ16769 361 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 C16orf89Q6UX73 402 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 GALNT4Q8N4A0 578 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 MASTLQ96GX5 879 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
HPS4-202ENST00000398145 BTBD10Q9BSF8 475 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 TMEM120AQ9BXJ8 343 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 C2orf40Q9H1Z8 148 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 GANQ9H2C0 597 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 KRT82Q9NSB4 513 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 CIITAP33076 1130 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 SGSM1Q2NKQ1 1148 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 COBLL1Q53SF7 1204 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 XKR3Q5GH77 459 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 TFDP3Q5H9I0 405 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 KAT2BQ92831 832 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 TBX20Q9UMR3 447 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 ARHGAP26Q9UNA1 814 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 DTNAQ9Y4J8 743 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 BRD2P25440 801 aaKnown RBP11.57□□□□□ -0.56
HPS4-202ENST00000398145 GTF2H1P32780 548 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 EFNA5P52803 228 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 ITPK1Q13572 414 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 LRRC8EQ6NSJ5 796 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 HHIPL2Q6UWX4 724 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 RNF169Q8NCN4 708 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 DCLK3Q9C098 648 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 SAR1AQ9NR31 198 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 KCNH7Q9NS40 1196 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 PCYOX1Q9UHG3 505 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 SHOC2Q9UQ13 582 aa11.57□□□□□ -0.56
HPS4-202ENST00000398145 IL10P22301 178 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 MMP13P45452 471 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 PRAMEP78395 509 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 FASTKD1Q53R41 847 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 TAS1R2Q8TE23 839 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 PBXIP1Q96AQ6 731 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 ACSF2Q96CM8 615 aaPredicted RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 MED15Q96RN5 788 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 SHCBP1LQ9BZQ2 653 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 MCM8Q9UJA3 840 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 TNFAIP2Q03169 654 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 BTKQ06187 659 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 APTXQ7Z2E3 356 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 TXNRD3Q86VQ6 643 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 EXT2Q93063 718 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 DNAJC19Q96DA6 116 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 TMA16Q96EY4 203 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 HES6Q96HZ4 224 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 PPP1R16BQ96T49 567 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 CCT7Q99832 543 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 ANKEF1Q9NU02 776 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 STAP1Q9ULZ2 295 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 SNX5Q9Y5X3 404 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 ZC3H11AO75152 810 aaKnown RBP eCLIP11.56□□□□□ -0.56
HPS4-202ENST00000398145 APBA3O96018 575 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 KRT16P08779 473 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 COG2Q14746 738 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms