RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 SLC8B1Q6J4K2 584 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 PPFIBP1Q86W92 1011 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 OR10T2Q8NGX3 314 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 IMPG2Q9BZV3 1241 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 SMYD3Q9H7B4 428 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 VRTNQ9H8Y1 702 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 RAB20Q9NX57 234 aa27.21■■□□□ 1.95
TMEM55B-202ENST00000398020 KCNJ18B7U540 433 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 HCRTO43612 131 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 NCK2O43639 380 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 AFPP02771 609 aaKnown RBP27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 LTBRP36941 435 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 ROR1Q01973 937 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 KCNJ12Q14500 433 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 OSTM1Q86WC4 334 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 KBTBD7Q8WVZ9 684 aa27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 UBE2ZQ9H832 354 aaPredicted RBP27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 APOBEC3GQ9HC16 384 aaKnown RBP27.2■■□□□ 1.94
TMEM55B-202ENST00000398020 RAP1GAPP47736 663 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 NOP14P78316 857 aaKnown RBP27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 LIMS2Q7Z4I7 341 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 TMEM86AQ8N2M4 240 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 TAF4BQ92750 862 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 HLA-CQ95604 372 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 MRPL45Q9BRJ2 306 aaKnown RBP27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 CLEC1BQ9P126 229 aa27.19■■□□□ 1.94
TMEM55B-202ENST00000398020 WDR27A2RRH5 827 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 H3BQ06 376 aaPredicted RBP27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 CPB1P15086 417 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 KCNA5P22460 613 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 ACAT1P24752 427 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 ZNF165P49910 485 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 CDH8P55286 799 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 RAB33AQ14088 237 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 NCAPHQ15003 741 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 THEM5Q8N1Q8 247 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 DDX43Q9NXZ2 648 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 COQ4Q9Y3A0 265 aa27.18■■□□□ 1.94
TMEM55B-202ENST00000398020 FSD2A1L4K1 749 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 CLUL1Q15846 466 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 TCP11X2Q5H9J9 407 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 CDKAL1Q5VV42 579 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 LILRA6Q6PI73 481 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 DPH6Q7L8W6 267 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 CCDC150Q8NCX0 1101 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 MAN1C1Q9NR34 630 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 OR6C75A6NL08 312 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 PRKCSHP14314 528 aaPredicted RBP27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 CASP10Q92851 521 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 PGLYRP2Q96PD5 576 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 BPIFA3Q9BQP9 254 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 TUBGCP2Q9BSJ2 902 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 APOL5Q9BWW9 433 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 SDCBP2Q9H190 292 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 C5orf42Q9H799 3197 aa27.17■■□□□ 1.94
TMEM55B-202ENST00000398020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 GABRDO14764 452 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 N4BP1O75113 896 aaKnown RBP27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 LMO2P25791 158 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 ASPAP45381 313 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 TFF2Q03403 129 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 LRMPQ12912 555 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 TMEM184AQ6ZMB5 413 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 RNF19BQ6ZMZ0 732 aa27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 DHX40Q8IX18 779 aaKnown RBP27.16■■□□□ 1.94
TMEM55B-202ENST00000398020 SPDYE4A6NLX3 237 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 PDGFRBP09619 1106 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 WEE2P0C1S8 567 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 SRGAP2BP0DMP2 458 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 P4HA1P13674 534 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 EEF1GP26641 437 aaKnown RBP27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 MAN2A1Q16706 1144 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 WDR44Q5JSH3 913 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 C12orf76Q8N812 135 aaPredicted RBP27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 KREMEN2Q8NCW0 462 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 OR6B3Q8NGW1 331 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 ZNF461Q8TAF7 563 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 TATDN2Q93075 761 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 SNX25Q9H3E2 840 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 NME7Q9Y5B8 376 aa27.15■■□□□ 1.94
TMEM55B-202ENST00000398020 TACC1O75410 805 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 WARSP23381 471 aaKnown RBP27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 LHX1P48742 406 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 CCDC142Q17RM4 750 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 SLC39A12Q504Y0 691 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 LRRTM3Q86VH5 581 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 FEZF2Q8TBJ5 459 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 OXCT2Q9BYC2 517 aaPredicted RBP27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 NIF3L1Q9GZT8 377 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 HSD3B7Q9H2F3 369 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 TAB2Q9NYJ8 693 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 FBXW11Q9UKB1 542 aa27.14■■□□□ 1.94
TMEM55B-202ENST00000398020 PMM2O15305 246 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 ABLIM3O94929 683 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 GNL1P36915 607 aaPredicted RBP27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 CETN1Q12798 172 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 MIIPQ5JXC2 388 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 ANKRD54Q6NXT1 300 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 CRACR2AQ9BSW2 395 aa27.14■■□□□ 1.93
TMEM55B-202ENST00000398020 ZCWPW1Q9H0M4 648 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms