RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 C9orf57Q5W0N0 161 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SLC39A4Q6P5W5 647 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 TXNDC11Q6PKC3 985 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 ITIH5Q86UX2 942 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 LONP2Q86WA8 852 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SYNPOQ8N3V7 929 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 TTC9BQ8N6N2 239 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 LRRC15Q8TF66 581 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 BICD1Q96G01 975 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 AK8Q96MA6 479 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CNTNAP3BQ96NU0 1288 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 FIZ1Q96SL8 496 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SLC46A2Q9BY10 475 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 ZCWPW1Q9H0M4 648 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 RBM12Q9NTZ6 932 aaKnown RBP12.94□□□□□ -0.34
SYNE4-203ENST00000397428 BLOC1S4Q9NUP1 217 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 F5P12259 2224 aa12.94□□□□□ -0.34
SYNE4-203ENST00000397428 SLC30A4O14863 429 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 HNRNPDLO14979 420 aaKnown RBP12.93□□□□□ -0.34
SYNE4-203ENST00000397428 TRAK2O60296 914 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 SOAT2O75908 522 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 GABRR2P28476 465 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 CCINQ13939 588 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 MYCT1Q8N699 235 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 OR10T2Q8NGX3 314 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 CDK5RAP3Q96JB5 506 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 ZFYVE19Q96K21 471 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 MSTO1Q9BUK6 570 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 ASB7Q9H672 318 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 C2orf42Q9NWW7 574 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 KIF3AQ9Y496 699 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.93□□□□□ -0.34
SYNE4-203ENST00000397428 STYXL1Q9Y6J8 313 aa12.93□□□□□ -0.34
SYNE4-203ENST00000397428 ANKRD63C9JTQ0 380 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 DPYSL4O14531 572 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 NFICP08651 508 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 ODC1P11926 461 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 ABCD1P33897 745 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 PLCB2Q00722 1185 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 SRSF5Q13243 272 aaKnown RBP12.92□□□□□ -0.34
SYNE4-203ENST00000397428 ITPRIPL2Q3MIP1 535 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 ARHGAP15Q53QZ3 475 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 Q6ZS52 159 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 GPBP1Q86WP2 473 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 BPIFB1Q8TDL5 484 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 C2orf15Q8WU43 125 aaKnown RBP12.92□□□□□ -0.34
SYNE4-203ENST00000397428 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 PARVGQ9HBI0 331 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 GKN1Q9NS71 199 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 DSEQ9UL01 958 aa12.92□□□□□ -0.34
SYNE4-203ENST00000397428 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 SOBPA7XYQ1 873 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 CYB561D2O14569 222 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 FOXD2O60548 495 aaPredicted RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 PRAMEF12O95522 483 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 F11P03951 625 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 ADRB1P08588 477 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 ATF6P18850 670 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 HOXC13P31276 330 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 UBA7P41226 1012 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 ACOT2P49753 483 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 TNK2Q07912 1038 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 SMARCB1Q12824 385 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 PON2Q15165 354 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 SLC39A12Q504Y0 691 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 CRELD2Q6UXH1 353 aaPredicted RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 PRR23BQ6ZRT6 265 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 THEM5Q8N1Q8 247 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 NETO1Q8TDF5 533 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 THG1LQ9NWX6 298 aaKnown RBP12.91□□□□□ -0.34
SYNE4-203ENST00000397428 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 ZMYM5Q9UJ78 669 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
SYNE4-203ENST00000397428 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 CCDC163A0A0D9SF12 145 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.9□□□□□ -0.34
SYNE4-203ENST00000397428 FAM13AO94988 1023 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 HMGA1P17096 107 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms