RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SUSD6Q92537 303 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 CEP63Q96MT8 703 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 PRKD2Q9BZL6 878 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 NXF1Q9UBU9 619 aaKnown RBP27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 PRKAG3Q9UGI9 489 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 L1RE1Q9UN81 338 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 POLIQ9UNA4 740 aa27.23■■□□□ 1.95
TSPAN4-207ENST00000397411 XYLBO75191 536 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 FGFR1OPO95684 399 aaKnown RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 HNRNPA1P09651 372 aaKnown RBP eCLIP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 ATF2P15336 505 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 SSTR3P32745 418 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 GCLMP48507 274 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 CCDC40Q4G0X9 1142 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 RNF19BQ6ZMZ0 732 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 C15orf39Q6ZRI6 1047 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 RTL10Q7L3V2 364 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 ADGRF2Q8IZF7 708 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 NECAB3Q96P71 396 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 PGLYRP2Q96PD5 576 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 PHF7Q9BWX1 381 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 DDX43Q9NXZ2 648 aaKnown RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 ARMCX3Q9UH62 379 aaPredicted RBP27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 CDH22Q9UJ99 828 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 MAFFQ9ULX9 164 aa27.22■■□□□ 1.95
TSPAN4-207ENST00000397411 LRG1P02750 347 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 PIK3CAP42336 1068 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 LHX1P48742 406 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 TSPY1Q01534 308 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 GPR17Q13304 367 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 SGSM1Q2NKQ1 1148 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 ZNF699Q32M78 642 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 ZACNQ401N2 412 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 DCAF17Q5H9S7 520 aaPredicted RBP27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 ZNF667Q5HYK9 610 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 TTI2Q6NXR4 508 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 FILIP1Q7Z7B0 1213 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 DCP1BQ8IZD4 617 aaKnown RBP27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 RPGRIP1Q96KN7 1286 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 SNX25Q9H3E2 840 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 METTL14Q9HCE5 456 aaKnown RBP27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 DACH1Q9UI36 760 aa27.21■■□□□ 1.95
TSPAN4-207ENST00000397411 CCL16O15467 120 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 P4HA1P13674 534 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 GTF2H1P32780 548 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 SOWAHAQ2M3V2 549 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 SLC39A12Q504Y0 691 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 ADHFE1Q8IWW8 467 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 ZC3H3Q8IXZ2 948 aaKnown RBP27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 CCDC150Q8NCX0 1101 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 OR10T2Q8NGX3 314 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 SPATA18Q8TC71 538 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 TMEM209Q96SK2 561 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 DUSP9Q99956 384 aaKnown RBP27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 IMPG2Q9BZV3 1241 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 ZCWPW1Q9H0M4 648 aa27.2■■□□□ 1.94
TSPAN4-207ENST00000397411 STAU1O95793 577 aaKnown RBP27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 NLRP12P59046 1061 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 PPP3CAQ08209 521 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 TPD52L1Q16890 204 aaPredicted RBP27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 C1orf220Q5T0J3 134 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 FOXR2Q6PJQ5 311 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 TCEAL8Q8IYN2 117 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 SRRTQ9BXP5 876 aaKnown RBP27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 COL25A1Q9BXS0 654 aaPredicted RBP27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 POMKQ9H5K3 350 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 TMEM8AQ9HCN3 771 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 RWDD2AQ9UIY3 292 aa27.19■■□□□ 1.94
TSPAN4-207ENST00000397411 SEC24AO95486 1093 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 VNN1O95497 513 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 HLA-DRAP01903 254 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 PCSK1P29120 753 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 HOXA9P31269 272 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 KRT39Q6A163 491 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 FRMD5Q7Z6J6 570 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 CREBRFQ8IUR6 639 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 ELMOD1Q8N336 334 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 TAF4BQ92750 862 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 RTP3Q9BQQ7 232 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 ACBD6Q9BR61 282 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 NR2E1Q9Y466 385 aa27.18■■□□□ 1.94
TSPAN4-207ENST00000397411 GNA14O95837 355 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 ACAT1P24752 427 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 GNL1P36915 607 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 SMARCB1Q12824 385 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 DUSP4Q13115 394 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 GJD3Q8N144 294 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 OR6B3Q8NGW1 331 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 ZNF707Q96C28 371 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 XYLT2Q9H1B5 865 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.17■■□□□ 1.945e-7■■■■■ 86.5
TSPAN4-207ENST00000397411 TSC2P49815 1807 aa27.17■■□□□ 1.94
TSPAN4-207ENST00000397411 PDGFRBP09619 1106 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 FAM163BP0C2L3 166 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 SP100P23497 879 aaPredicted RBP27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 MXI1P50539 228 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 CDR1P51861 262 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 ZP2Q05996 745 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 SASS6Q6UVJ0 657 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 OSTM1Q86WC4 334 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms