RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ZBED8Q8IZ13 594 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 CPXCR1Q8N123 301 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 GRAMD1AQ96CP6 724 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 KCNK13Q9HB14 408 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 TLR3O15455 904 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 PSTPIP1O43586 416 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 ICAM1P05362 532 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 KRT4P19013 534 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 NSFP46459 744 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 PTDSS1P48651 473 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 RAD23BP54727 409 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 FKBP1AP62942 108 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 LACTBP83111 547 aaPredicted RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 PGM5Q15124 567 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 ZACNQ401N2 412 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 GSTA5Q7RTV2 222 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 ENDOVQ8N8Q3 282 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 EXD1Q8NHP7 514 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 CORO1CQ9ULV4 474 aaPredicted RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 SYNPO2Q9UMS6 1093 aa14.72□□□□□ -0.05
NUP98-204ENST00000397004 MYH9P35579 1960 aaKnown RBP14.72□□□□□ -0.05
NUP98-204ENST00000397004 GSTTP1A0A1W2PQM5 241 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 GOLGA8RI6L899 631 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 HLA-DRAP01903 254 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 SEZ6Q53EL9 994 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 CAPRIN2Q6IMN6 1127 aaKnown RBP14.71□□□□□ -0.05
NUP98-204ENST00000397004 LVRNQ6Q4G3 990 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 TAB3Q8N5C8 712 aaPredicted RBP14.71□□□□□ -0.05
NUP98-204ENST00000397004 ASAP3Q8TDY4 903 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 CADM1Q9BY67 442 aaKnown RBP14.71□□□□□ -0.05
NUP98-204ENST00000397004 UBN1Q9NPG3 1134 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 KMT5AQ9NQR1 393 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 NUB1Q9Y5A7 615 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 TRAFD1O14545 582 aaPredicted RBP14.71□□□□□ -0.05
NUP98-204ENST00000397004 ALOX15BO15296 676 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 MAN1A1P33908 653 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 PEX19P40855 299 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 TFDP1Q14186 410 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 CLNKQ7Z7G1 428 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 ABRAQ8N0Z2 381 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 ARFGAP1Q8N6T3 406 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 CHURC1Q8WUH1 139 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 PLCD4Q9BRC7 762 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 PLVAPQ9BX97 442 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 TLE6Q9H808 572 aa14.71□□□□□ -0.05
NUP98-204ENST00000397004 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
NUP98-204ENST00000397004 C3orf70A6NLC5 250 aaPredicted RBP14.71□□□□□ -0.06
NUP98-204ENST00000397004 CA4P22748 312 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 ALDH1B1P30837 517 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 RPS6P62753 249 aaKnown RBP14.71□□□□□ -0.06
NUP98-204ENST00000397004 HSF5Q4G112 596 aaPredicted RBP14.71□□□□□ -0.06
NUP98-204ENST00000397004 CES4AQ5XG92 561 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 TMEM270Q6UE05 265 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 NUDCD1Q96RS6 583 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 PIDD1Q9HB75 910 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 TXLNGQ9NUQ3 528 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.06
NUP98-204ENST00000397004 DCTN4Q9UJW0 460 aa14.71□□□□□ -0.06
NUP98-204ENST00000397004 TTLL13PA6NNM8 815 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 ENO4A6NNW6 628 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 GLRA2P23416 452 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 IGDCC3Q8IVU1 814 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 GPD1LQ8N335 351 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 OR5B17Q8NGF7 314 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 ARL8BQ9NVJ2 186 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 TJP2Q9UDY2 1190 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 RGS20O76081 388 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 MMP10P09238 476 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 ATF7P17544 494 aaPredicted RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 KRT15P19012 456 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 SSR1P43307 286 aaKnown RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 SLC18A1P54219 525 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 PSMC5P62195 406 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 SNRPFP62306 86 aaKnown RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 SPARCL1Q14515 664 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 CCDC125Q86Z20 511 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 KIAA0319LQ8IZA0 1049 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 TMEM130Q8N3G9 435 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 UCMAQ8WVF2 138 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 FBXO6Q9NRD1 293 aaPredicted RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 PGAP2Q9UHJ9 254 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 ARID2Q68CP9 1835 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 HNRNPDLO14979 420 aaKnown RBP14.7□□□□□ -0.06
NUP98-204ENST00000397004 CHRNA5P30532 468 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 GTF2H1P32780 548 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 TTC7BQ86TV6 843 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 LARGE2Q8N3Y3 721 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 WDTC1Q8N5D0 677 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 INPP5DQ92835 1189 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 FAM136AQ96C01 138 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 VPS37BQ9H9H4 285 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 ZNF148Q9UQR1 794 aa14.7□□□□□ -0.06
NUP98-204ENST00000397004 COL4A5P29400 1685 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 TMEM191CA6NGB0 347 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 E5RJQ4 531 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms