RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SLC10A6Q3KNW5 377 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ABCA7Q8IZY2 2146 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ZCCHC14Q8WYQ9 949 aaKnown RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 WASF1Q92558 559 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 TARS2Q9BW92 718 aaKnown RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 MRPL4Q9BYD3 311 aaKnown RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 IL21Q9HBE4 155 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 POLR3BQ9NW08 1133 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 HSFX1Q9UBD0 423 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ORC3Q9UBD5 711 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-202ENST00000396629 SLC27A5Q9Y2P5 690 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 NEUROG3Q9Y4Z2 214 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 IGF2RP11717 2491 aa9.2□□□□□ -0.94
SCFD1-202ENST00000396629 ASPMQ8IZT6 3477 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 MTMR11A4FU01 709 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TAF4O00268 1085 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 DCLK1O15075 740 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 EPB41L2O43491 1005 aaKnown RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 PFKFB2O60825 505 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 DTNBO60941 627 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 REC8O95072 547 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 FDPSP14324 419 aaKnown RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 LRPAP1P30533 357 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 MPZL3Q6UWV2 235 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ITIH5Q86UX2 942 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 FBRSL1Q9HCM7 1045 aaKnown RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ARHGAP28Q9P2N2 729 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TUBGCP4Q9UGJ1 667 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TIMM13Q9Y5L4 95 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 MYH11P35749 1972 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 OTOL1A6NHN0 477 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 BTBD18B2RXH4 712 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 KHNYNO15037 678 aaKnown RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 APBB3O95704 486 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 DRD1P21728 446 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 NPTX2P47972 431 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 GALK1P51570 392 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 CYP4F8P98187 520 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ECM1Q16610 540 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 SYT13Q7L8C5 426 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TMEM130Q8N3G9 435 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TTC9BQ8N6N2 239 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ATAD1Q8NBU5 361 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ERMNQ8TAM6 284 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ZBTB45Q96K62 511 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-202ENST00000396629 SLC46A2Q9BY10 475 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 ZMYM5Q9UJ78 669 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 TBX20Q9UMR3 447 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 PKD1L2Q7Z442 2459 aa9.19□□□□□ -0.94
SCFD1-202ENST00000396629 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 ASCC3Q8N3C0 2202 aaKnown RBP9.18□□□□□ -0.94
SCFD1-202ENST00000396629 CCDC169A6NNP5 214 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 SOAT2O75908 522 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 TYMPP19971 482 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 CDC25CP30307 473 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 PEX3P56589 373 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 AMPD2Q01433 879 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 PMS2CLQ68D20 193 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 USP37Q86T82 979 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 C11orf74Q86VG3 221 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 CMTM8Q8IZV2 173 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 TCHPQ9BT92 498 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
SCFD1-202ENST00000396629 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
SCFD1-202ENST00000396629 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
SCFD1-202ENST00000396629 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
SCFD1-202ENST00000396629 LARGE1O95461 756 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 CYP3A5P20815 502 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 DMC1Q14565 340 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 TRIM68Q6AZZ1 485 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 OVOS1Q6IE37 1185 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 DIS3L2Q8IYB7 885 aaKnown RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 DAW1Q8N136 415 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 RPLP0P6Q8NHW5 317 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 YTHDC1Q96MU7 727 aaKnown RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 LPIN3Q9BQK8 851 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 BHMT2Q9H2M3 363 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 EBF3Q9H4W6 596 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 PLEKHA5Q9HAU0 1116 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 PLXND1Q9Y4D7 1925 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 FAM221BA6H8Z2 402 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 PATE3B3GLJ2 98 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 CAPNS1P04632 268 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 ARSAP15289 507 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 ATF6P18850 670 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 MCM7P33993 719 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 TUFMP49411 452 aaKnown RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 IRX4P78413 519 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 DSTYKQ6XUX3 929 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 EZH1Q92800 747 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 USP13Q92995 863 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 ACDQ96AP0 544 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 GCNAQ96QF7 691 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 P2RY13Q9BPV8 354 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms