RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CDK17Q00537 523 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 UBE2SQ16763 222 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CYFIP1Q7L576 1253 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 COA7Q96BR5 231 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 THUMPD3Q9BV44 507 aaKnown RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ADORA1P30542 326 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CYP4A22Q5TCH4 519 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ROGDIQ9GZN7 287 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 PEX5P50542 639 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 OLFML1Q6UWY5 402 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 INTS13Q9NVM9 706 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 TMCC3Q9ULS5 477 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ARHGAP31Q2M1Z3 1444 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ABCC10Q5T3U5 1492 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 RALAP11233 206 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 TWF1Q12792 350 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 AGBL2Q5U5Z8 902 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 EPHX4Q8IUS5 362 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 UBA2Q9UBT2 640 aaPredicted RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ABCB11O95342 1321 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 E7ENQ6 273 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 RGS4P49798 205 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 USP10Q14694 798 aaKnown RBP10.76□□□□□ -0.69
COL4A4-201ENST00000396625 MAPK6Q16659 721 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 LPCAT2Q7L5N7 544 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 CYP4Z1Q86W10 505 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 RCOR2Q8IZ40 523 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 PIDD1Q9HB75 910 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 NDUFA13Q9P0J0 144 aa10.76□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF804BA4D1E1 1349 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TRIM49D1C9J1S8 452 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 CPA2P48052 419 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 CCDC17Q96LX7 622 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 FAM213AQ9BRX8 229 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SNX13Q9Y5W8 968 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SNUPNO95149 360 aaKnown RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF682O95780 498 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 BMP3P12645 472 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 EPB42P16452 691 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SULT1E1P49888 294 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 FAM83BQ5T0W9 1011 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 NAIF1Q69YI7 327 aaPredicted RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 THNSL1Q8IYQ7 743 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SIX5Q8N196 739 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 PACSIN1Q9BY11 444 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ING3Q9NXR8 418 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TRAF2Q12933 501 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 DOK7Q18PE1 504 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF284Q2VY69 593 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SPATA4Q8NEY3 305 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 A0A1W2PRG6 482 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 CNOT3O75175 753 aaKnown RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF544Q6NX49 715 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ARHGEF26Q96DR7 871 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 AGAP3Q96P47 875 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TGFBR2P37173 567 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 CYP4Z2PQ8N1L4 340 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TMEM79Q9BSE2 394 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TUBA8Q9NY65 449 aaPredicted RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 SH3GLB1Q9Y371 365 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 KIAA0232Q92628 1395 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 MTMR1Q13613 665 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 PCSK7Q16549 785 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 GSTA3Q16772 222 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 MCPH1Q8NEM0 835 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 WDR24Q96S15 920 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 BTBD7Q9P203 1132 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 ASMTLO95671 621 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 A1BGP04217 495 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 GUCY1A2P33402 732 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 PRCPP42785 496 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 RFX3P48380 749 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 CHRNDQ07001 517 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 EDRF1Q3B7T1 1238 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 MUC3BQ9H195 1237 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 NMRK1Q9NWW6 199 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 VAV3Q9UKW4 847 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 PNMA8BQ9ULN7 279 aaPredicted RBP10.75□□□□□ -0.69
COL4A4-201ENST00000396625 NEU2Q9Y3R4 380 aa10.75□□□□□ -0.69
COL4A4-201ENST00000396625 TPST1O60507 370 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 FCGR1AP12314 374 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 NOS3P29474 1203 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 SLC1A1P43005 524 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF589Q86UQ0 364 aaPredicted RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 SCUBE1Q8IWY4 988 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 FAM167AQ96KS9 214 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 C1orf232A0A0U1RR37 186 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 NDUFB5O43674 189 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 MED26O95402 600 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CYP2C19P33261 490 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CHRNB3Q05901 458 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ANKS6Q68DC2 871 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 OSBPL6Q9BZF3 934 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ANTXR1Q9H6X2 564 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 XDHP47989 1333 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms