RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MANSC4A6NHS7 340 aaPredicted RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 A6NJR5 290 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 DYNC1LI2O43237 492 aaPredicted RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 GJB6O95452 261 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 SMIM10L2AP0DMW4 78 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 SMIM10L2BP0DMW5 78 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 POLR2BP30876 1174 aaKnown RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 TAS2R40P59535 323 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 TAF1CQ15572 869 aaPredicted RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 TLK2Q86UE8 772 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 ERICH1Q86X53 443 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 MCEEQ96PE7 176 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 FAM49AQ9H0Q0 323 aaPredicted RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 SDCBP2Q9H190 292 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 ZDHHC18Q9NUE0 388 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 STRIP2Q9ULQ0 834 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 GNEQ9Y223 722 aaKnown RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 USTQ9Y2C2 406 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 NRCAMQ92823 1304 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 PCNTO95613 3336 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 TCRBV5S1A1TA0A578 114 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 TMEM191CA6NGB0 347 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 IGF2BP3O00425 579 aaKnown RBP eCLIP15.85■□□□□ 0.13
CBX3-202ENST00000396386 ECEL1O95672 775 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 SSR1P43307 286 aaKnown RBP15.85■□□□□ 0.13
CBX3-202ENST00000396386 RAD23BP54727 409 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 CDC42EP1Q00587 391 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 UAP1Q16222 522 aaPredicted RBP15.85■□□□□ 0.13
CBX3-202ENST00000396386 KCTD19Q17RG1 926 aaPredicted RBP15.85■□□□□ 0.13
CBX3-202ENST00000396386 KIZQ2M2Z5 673 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 TTMPQ5BVD1 217 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 DAB2IPQ5VWQ8 1189 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 CST9Q5W186 159 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 GCOM2Q9BZD3 368 aaPredicted RBP15.85■□□□□ 0.13
CBX3-202ENST00000396386 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 SNX24Q9Y343 169 aa15.85■□□□□ 0.13
CBX3-202ENST00000396386 CILPO75339 1184 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 NPTXRO95502 500 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 STAU1O95793 577 aaKnown RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 FGFR4P22455 802 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 GJC1P36383 396 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 FLT3P36888 993 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 SPDYCQ5MJ68 293 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 PRAMEF19Q5SWL8 479 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 DCUN1D2Q6PH85 259 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 C3orf20Q8ND61 904 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 EXD1Q8NHP7 514 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 UBLCP1Q8WVY7 318 aaPredicted RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 SLCO2A1Q92959 643 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 ARL8AQ96BM9 186 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 HPDLQ96IR7 371 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 SMIM35A0A1B0GVV1 85 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 PPFIA2O75334 1257 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 KRT14P02533 472 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 CETN2P41208 172 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 RPL21P46778 160 aaKnown RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 CDH8P55286 799 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 RPL7AP62424 266 aaKnown RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 RBP5P82980 135 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 PTPN11Q06124 597 aaPredicted RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 DHX9Q08211 1270 aaKnown RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 MFSD10Q14728 455 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 PPP1R15BQ5SWA1 713 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 OLFML2BQ68BL8 750 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 DOCK3Q8IZD9 2030 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 TMEM130Q8N3G9 435 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 WDTC1Q8N5D0 677 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 FAM129AQ9BZQ8 928 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 FAM124BQ9H5Z6 455 aaPredicted RBP15.84■□□□□ 0.13
CBX3-202ENST00000396386 DPP3Q9NY33 737 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 GRHL1Q9NZI5 618 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 FLRT1Q9NZU1 646 aa15.84■□□□□ 0.13
CBX3-202ENST00000396386 TRIP11Q15643 1979 aa15.83■□□□□ 0.13
CBX3-202ENST00000396386 ERICH4A6NGS2 130 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 GOLGA6L10A6NI86 522 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 O00370 1275 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 ZNF865P0CJ78 1059 aaPredicted RBP15.83■□□□□ 0.12
CBX3-202ENST00000396386 CYP2C9P11712 490 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 ZNF157P51786 506 aaPredicted RBP15.83■□□□□ 0.12
CBX3-202ENST00000396386 ZNF252P-AS1Q0IIN9 211 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 TMEM62Q0P6H9 643 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.12
CBX3-202ENST00000396386 PPP1R7Q15435 360 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 PTPN20Q4JDL3 420 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 CYP4A22Q5TCH4 519 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 SYDE1Q6ZW31 735 aaPredicted RBP15.83■□□□□ 0.12
CBX3-202ENST00000396386 TTC39CQ8N584 583 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 SLC4A11Q8NBS3 891 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 GRK7Q8WTQ7 553 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 C1orf54Q8WWF1 131 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 KAT2BQ92831 832 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms