RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HLA-DRAP01903 254 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ODC1P11926 461 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DHX9Q08211 1270 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ACVR2BQ13705 512 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ARID5BQ14865 1188 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TMCO4Q5TGY1 634 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 BCAS4Q8TDM0 211 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FBXL18Q96ME1 805 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 INTS9Q9NV88 658 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SNUPNO95149 360 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TTC4O95801 387 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ACTN1P12814 892 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CEP85LQ5SZL2 805 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PLA2G4FQ68DD2 849 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC6Q86X45 466 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RBBP8NLQ8NC74 664 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF606Q8WXB4 792 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC39Q96DD0 335 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MFSD14AQ96MC6 490 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ISCUQ9H1K1 167 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PABPC3Q9H361 631 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MORF4L1Q9UBU8 362 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZMYM5Q9UJ78 669 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SNX9Q9Y5X1 595 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CNTNAP2Q9UHC6 1331 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PLTPP55058 493 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CNGA2Q16280 664 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SH3BP5LQ7L8J4 393 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF354CQ86Y25 554 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DCP1BQ8IZD4 617 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RNF169Q8NCN4 708 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 NKX2-3Q8TAU0 364 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CAPS2Q9BXY5 557 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CISHQ9NSE2 258 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SIK3Q9Y2K2 1263 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CD44P16070 742 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 HADHAP40939 763 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 SH3BGRP55822 239 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PSMC6P62333 389 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CC2D1AQ6P1N0 951 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 SCYL2Q6P3W7 929 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC62Q6P9F0 684 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 FBXO38Q6PIJ6 1188 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 FEZF2Q8TBJ5 459 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 KCNN1Q92952 543 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 SRPK1Q96SB4 655 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 MED10Q9BTT4 135 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ELOVL4Q9GZR5 314 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 SCN1AP35498 2009 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 TLR2O60603 784 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PHF2O75151 1096 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PBX1P40424 430 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ALDH7A1P49419 539 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 RNASE9P60153 205 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PDK1Q15118 436 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 KIAA1755Q5JYT7 1200 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 DNAAF3Q8N9W5 541 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CXorf38Q8TB03 319 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 WDR24Q96S15 920 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 OSBPL8Q9BZF1 889 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PSD3Q9NYI0 1048 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ARHGAP20Q9P2F6 1191 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 NRXN2Q9P2S2 1712 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ATP5HO75947 161 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 VIMP08670 466 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PCSK2P16519 638 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC15Q0P6D6 951 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 SNX1Q13596 522 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 GPR142Q7Z601 462 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 LINC00523Q86TU6 105 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 EPS8L1Q8TE68 723 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ANAPC5Q9UJX4 755 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ADAM21Q9UKJ8 722 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 HPCAL4Q9UM19 191 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 AGAP1Q9UPQ3 857 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PDGFRAP16234 1089 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 HOXB8P17481 243 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 MORF4L2Q15014 288 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ATG16L1Q676U5 607 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 EPM2AIP1Q7L775 607 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ZSWIM1Q9BR11 485 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PAK5Q9P286 719 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 ATP8A1Q9Y2Q0 1164 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CYP26A1O43174 497 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 RALAP11233 206 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 RARGP13631 454 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 NR1D1P20393 614 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 HTR7P34969 479 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PCK1P35558 622 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 GJC1P36383 396 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 MSH2P43246 934 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 RPL10AP62906 217 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 PLCB4Q15147 1175 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 METTL3Q86U44 580 aaKnown RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CBWD2Q8IUF1 395 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 REXO1L1PQ8IX06 675 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 C17orf53Q8N3J3 647 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC63Q8NA47 563 aa3.56□□□□□ -1.84
VPS13C-203ENST00000395896 TAS1R2Q8TE23 839 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms