RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 WSCD1Q658N2 575 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 CENPPQ6IPU0 288 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 RNF19BQ6ZMZ0 732 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 TRIM67Q6ZTA4 783 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 OTOP3Q7RTS5 596 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 METTL23Q86XA0 190 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 TOP6BLQ8N6T0 577 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 PRSS33Q8NF86 280 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 ZCWPW1Q9H0M4 648 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 HSFX1Q9UBD0 423 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 L1RE1Q9UN81 338 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 MAPK8IP1Q9UQF2 711 aa14.37□□□□□ -0.11
HLA-DMA-202ENST00000395303 NUP210Q8TEM1 1887 aaPredicted RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 TMEM221A6NGB7 291 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 LRRIQ3A6PVS8 624 aaPredicted RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 M0R296 226 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 GABRDO14764 452 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 CCL16O15467 120 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 KINO60870 393 aaKnown RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 XYLBO75191 536 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 STAU1O95793 577 aaKnown RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 KRT19P08727 400 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 FAM163BP0C2L3 166 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 OR4Q2P0C623 313 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 ARPP19P56211 112 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 ZXDAP98168 799 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 ADCY1Q08828 1119 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 BFSP1Q12934 665 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 PDCL2Q8N4E4 241 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 TDRD5Q8NAT2 981 aaKnown RBP14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 PIDD1Q9HB75 910 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 INSL5Q9Y5Q6 135 aa14.36□□□□□ -0.11
HLA-DMA-202ENST00000395303 MTMR11A4FU01 709 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 IKBKBO14920 756 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 HUS1O60921 280 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 C4BPAP04003 597 aaKnown RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 NR2F2P24468 414 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 RPL13P26373 211 aaKnown RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 SMARCB1Q12824 385 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 C1orf220Q5T0J3 134 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 IER5LQ5T953 404 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 ADSSL1Q8N142 457 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 THEM5Q8N1Q8 247 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 HPDLQ96IR7 371 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 MKNK1Q9BUB5 465 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 CYP4F11Q9HBI6 524 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 TSHZ2Q9NRE2 1034 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 MAN1B1Q9UKM7 699 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 FRMD4BQ9Y2L6 1034 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 ZFP37Q9Y6Q3 630 aaPredicted RBP14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 CACNA1HO95180 2353 aa14.35□□□□□ -0.11
HLA-DMA-202ENST00000395303 PRRG1O14668 218 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 AKAP3O75969 853 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 LRG1P02750 347 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 ATICP31939 592 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 PPP1R2P41236 205 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 LHX1P48742 406 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 DLG4P78352 724 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 ADAM9Q13443 819 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 ZACNQ401N2 412 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 CEP135Q66GS9 1140 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 FOXR2Q6PJQ5 311 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 GRASPQ7Z6J2 395 aaPredicted RBP14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 OSTM1Q86WC4 334 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 MYADMQ96S97 322 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 R3HCC1Q9Y3T6 440 aaKnown RBP14.34□□□□□ -0.11
HLA-DMA-202ENST00000395303 USP34Q70CQ2 3546 aa14.33□□□□□ -0.11
HLA-DMA-202ENST00000395303 VNN1O95497 513 aa14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 RHOP08100 348 aa14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 PTPN2P17706 415 aa14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 WARSP23381 471 aaKnown RBP14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 SP100P23497 879 aaPredicted RBP14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 FSHRP23945 695 aa14.33□□□□□ -0.12
HLA-DMA-202ENST00000395303 PSMC2P35998 433 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms