RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SMYD5Q6GMV2 418 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 TOGARAM2Q6ZUX3 1019 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 DPH6Q7L8W6 267 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 OR6B3Q8NGW1 331 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 SPTLC3Q9NUV7 552 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 FAN1Q9Y2M0 1017 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 EPN1Q9Y6I3 576 aaPredicted RBP25.9■■□□□ 1.74
LRFN4-202ENST00000393952 TSC2P49815 1807 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 AKR1B10O60218 316 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 NDUFA10O95299 355 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 PAX3P23760 479 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 GNA15P30679 374 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 CYLC1P35663 651 aaPredicted RBP25.9■■□□□ 1.74
LRFN4-202ENST00000393952 KIF11P52732 1056 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 OSTM1Q86WC4 334 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 CMTR2Q8IYT2 770 aaKnown RBP25.9■■□□□ 1.74
LRFN4-202ENST00000393952 SLC4A11Q8NBS3 891 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 YME1L1Q96TA2 773 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 AGPAT1Q99943 283 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 DESI2Q9BSY9 194 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.9■■□□□ 1.74
LRFN4-202ENST00000393952 SNX25Q9H3E2 840 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 MARCH5Q9NX47 278 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 TIMM13Q9Y5L4 95 aaPredicted RBP25.9■■□□□ 1.74
LRFN4-202ENST00000393952 SLC4A7Q9Y6M7 1214 aa25.9■■□□□ 1.74
LRFN4-202ENST00000393952 M0QZQ0 153 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 HCRTO43612 131 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 CHRNB2P17787 502 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 WARSP23381 471 aaKnown RBP25.89■■□□□ 1.73
LRFN4-202ENST00000393952 BCAR1P56945 870 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 BTG3Q14201 252 aaPredicted RBP25.89■■□□□ 1.73
LRFN4-202ENST00000393952 LNX1Q8TBB1 728 aaPredicted RBP25.89■■□□□ 1.73
LRFN4-202ENST00000393952 DDX1Q92499 740 aaKnown RBP25.89■■□□□ 1.73
LRFN4-202ENST00000393952 TMEM176AQ96HP8 235 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 SUSD3Q96L08 255 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 COLEC11Q9BWP8 271 aa25.89■■□□□ 1.73
LRFN4-202ENST00000393952 PUF60Q9UHX1 559 aaKnown RBP25.89■■□□□ 1.73
LRFN4-202ENST00000393952 NT5C1B-RDH14C9J2C7 533 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 TADA2AO75478 443 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 GJB5O95377 273 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 ODC1P11926 461 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 GNL1P36915 607 aaPredicted RBP25.88■■□□□ 1.73
LRFN4-202ENST00000393952 GLYCTKQ8IVS8 523 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 NT5C1AQ9BXI3 368 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 ADAMTS1Q9UHI8 967 aa25.88■■□□□ 1.73
LRFN4-202ENST00000393952 A0A087X0T9 212 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 A8MXQ7 604 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 DDX3XO00571 662 aaKnown RBP eCLIP25.87■■□□□ 1.73
LRFN4-202ENST00000393952 PAEPP09466 180 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 FAM163BP0C2L3 166 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 FAM228BP0C875 321 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 TNFAIP3P21580 790 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 MAGEA10P43363 369 aaPredicted RBP25.87■■□□□ 1.73
LRFN4-202ENST00000393952 CDR2Q01850 454 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 GFPT1Q06210 699 aaPredicted RBP25.87■■□□□ 1.73
LRFN4-202ENST00000393952 VPS36Q86VN1 386 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 UNC93AQ86WB7 457 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 TMEM86AQ8N2M4 240 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 ACRBPQ8NEB7 543 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 ADAM28Q9UKQ2 775 aa25.87■■□□□ 1.73
LRFN4-202ENST00000393952 MRPL42Q9Y6G3 142 aaKnown RBP25.87■■□□□ 1.73
LRFN4-202ENST00000393952 EIF3CLB5ME19 914 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ZNF263O14978 683 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 THAP12O43422 761 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 MMEP08473 750 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 PDGFRBP09619 1106 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 CD19P15391 556 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 BRD2P25440 801 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 LMO2P25791 158 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ANXA13P27216 316 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 HTRA4P83105 476 aaPredicted RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 FMO1Q01740 532 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 SPOUT1Q5T280 376 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 TMEM173Q86WV6 379 aaPredicted RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 TFAP2BQ92481 460 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 SLC9A7Q96T83 725 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 EIF3CQ99613 913 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ZSWIM1Q9BR11 485 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ZBED2Q9BTP6 218 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 MTIF3Q9H2K0 278 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 SEPT11Q9NVA2 429 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 PCDHB8Q9UN66 801 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 STXBP5LQ9Y2K9 1186 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 CEP290O15078 2479 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 KIAA1671Q9BY89 1806 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 GABRDO14764 452 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 CYP27A1Q02318 531 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 BMS1Q14692 1282 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 SLC18A3Q16572 532 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ACOT1Q86TX2 421 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 PALB2Q86YC2 1186 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 HERC6Q8IVU3 1022 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 SLC30A5Q8TAD4 765 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 BCL7CQ8WUZ0 217 aaPredicted RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ZNF606Q8WXB4 792 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 DPEP3Q9H4B8 488 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 REXO2Q9Y3B8 237 aaKnown RBP25.86■■□□□ 1.73
LRFN4-202ENST00000393952 ADGRG1Q9Y653 693 aa25.86■■□□□ 1.73
LRFN4-202ENST00000393952 CYP11A1P05108 521 aa25.85■■□□□ 1.73
LRFN4-202ENST00000393952 ATP2A2P16615 1042 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms