RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 MCEEQ96PE7 176 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 PARVAQ9NVD7 372 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 DPP3Q9NY33 737 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 SMIM35A0A1B0GVV1 85 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 LSM8O95777 96 aaKnown RBP11.65□□□□□ -0.54
CASP3-202ENST00000393585 TCF4P15884 667 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 FLT3P36888 993 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 SLC1A1P43005 524 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 KCNJ1P48048 391 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 CPT1AP50416 773 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 NNTQ13423 1086 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 CUL1Q13616 776 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 SIX1Q15475 284 aaPredicted RBP11.65□□□□□ -0.54
CASP3-202ENST00000393585 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 JAMLQ86YT9 394 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 SLC4A11Q8NBS3 891 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
CASP3-202ENST00000393585 ZMAT2Q96NC0 199 aaKnown RBP11.65□□□□□ -0.54
CASP3-202ENST00000393585 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 NXF3Q9H4D5 531 aaKnown RBP11.65□□□□□ -0.54
CASP3-202ENST00000393585 CYTH4Q9UIA0 394 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 C2CD2Q9Y426 696 aa11.65□□□□□ -0.54
CASP3-202ENST00000393585 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 PPEF2O14830 753 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CILPO75339 1184 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CALB1P05937 261 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 SCN1AP35498 2009 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 ADAM17P78536 824 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CLUL1Q15846 466 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 DNAJC24Q6P3W2 148 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 KLHL11Q9NVR0 708 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 ADAM21Q9UKJ8 722 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CEP83Q9Y592 693 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 HAS3O00219 553 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 HSPA6P17066 643 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 ATICP31939 592 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CHRNA3P32297 505 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 OGDHQ02218 1023 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 ZNF252P-AS1Q0IIN9 211 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 KYAT1Q16773 422 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 C1orf54Q8WWF1 131 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 SEC14L1Q92503 715 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 ITGA11Q9UKX5 1188 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
CASP3-202ENST00000393585 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
CASP3-202ENST00000393585 TCRBV5S1A1TA0A578 114 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 TMEM191CA6NGB0 347 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 GOLGA8SH3BPF8 625 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 HSF2BPO75031 334 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
CASP3-202ENST00000393585 AKAP5P24588 427 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 CDH5P33151 784 aaPredicted RBP11.63□□□□□ -0.55
CASP3-202ENST00000393585 PTGIRP43119 386 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 RBP5P82980 135 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 DHX34Q14147 1143 aaKnown RBP11.63□□□□□ -0.55
CASP3-202ENST00000393585 PPP2R5EQ16537 467 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 FSCN1Q16658 493 aaKnown RBP11.63□□□□□ -0.55
CASP3-202ENST00000393585 ATP13A4Q4VNC1 1196 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 PPP1R2P3Q6NXS1 205 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 DCUN1D2Q6PH85 259 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 CCDC105Q8IYK2 499 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 TRPV1Q8NER1 839 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 SOCS4Q8WXH5 440 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 ATG4AQ8WYN0 398 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
CASP3-202ENST00000393585 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 ERP44Q9BS26 406 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 HEMGNQ9BXL5 484 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 MTUS1Q9ULD2 1270 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 SNX24Q9Y343 169 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
CASP3-202ENST00000393585 F8VP50 259 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 IRF5Q13568 498 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 SNX1Q13596 522 aa11.63□□□□□ -0.55
CASP3-202ENST00000393585 SNX17Q15036 470 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms