RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RLFQ13129 1914 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 CNTNAP2Q9UHC6 1331 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 GLRA2P23416 452 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 SLC18A1P54219 525 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 GPS1Q13098 491 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 LRRC38Q5VT99 294 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 SPOCD1Q6ZMY3 1216 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 UBR7Q8N806 425 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 REPS2Q8NFH8 660 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 PAIP2Q9BPZ3 127 aaKnown RBP19.91■□□□□ 0.78
CBX1-202ENST00000393408 MSTO1Q9BUK6 570 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 DRG1Q9Y295 367 aaKnown RBP19.91■□□□□ 0.78
CBX1-202ENST00000393408 STARD13Q9Y3M8 1113 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 IVNS1ABPQ9Y6Y0 642 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 A0A0B4J269 797 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 TCRBV5S1A1TA0A578 114 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 LDHAP00338 332 aaKnown RBP19.91■□□□□ 0.78
CBX1-202ENST00000393408 SUPT20HL2P0C7V6 817 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 MORF4L2Q15014 288 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 SUPT20HL1Q3ZLR7 823 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 PRCCQ92733 491 aaPredicted RBP19.91■□□□□ 0.78
CBX1-202ENST00000393408 TARS2Q9BW92 718 aaKnown RBP19.91■□□□□ 0.78
CBX1-202ENST00000393408 PORCNQ9H237 461 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 TRABDQ9H4I3 376 aa19.91■□□□□ 0.78
CBX1-202ENST00000393408 POC1B-GALNT4F8VUJ3 575 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 PTPN7P35236 360 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 MSH2P43246 934 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 NAMPTP43490 491 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 CXCL9Q07325 125 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 NCOA4Q13772 614 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 OASLQ15646 514 aaKnown RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 PKN2Q16513 984 aaKnown RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 ZFYVE27Q5T4F4 411 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 RNASEH2BQ5TBB1 312 aaKnown RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 SCARA3Q6AZY7 606 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 SNRNP48Q6IEG0 339 aaKnown RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 RGS9BPQ6ZS82 235 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 NIM1KQ8IY84 436 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 DEPTORQ8TB45 409 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 CDHR1Q96JP9 859 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 ANKFY1Q9P2R3 1169 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 A8MUI8 341 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 K7ERI5 159 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 HGSO14964 777 aaPredicted RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 UNC5CO95185 931 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 ATP4AP20648 1035 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 VCPP55072 806 aaKnown RBP19.9■□□□□ 0.78
CBX1-202ENST00000393408 PDE4CQ08493 712 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 KIF9Q9HAQ2 790 aa19.9■□□□□ 0.78
CBX1-202ENST00000393408 ADGRA2Q96PE1 1338 aa19.89■□□□□ 0.78
CBX1-202ENST00000393408 hCG_1818297A0A087WSY0 165 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 SPATA31C2B4DYI2 1134 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 F8VP50 259 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 ALOX15BO15296 676 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 ANP32DO95626 131 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 EDN1P05305 212 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 CALB1P05937 261 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 OGDHQ02218 1023 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 MYO1EQ12965 1108 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 DNAJC3Q13217 504 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 SPARCL1Q14515 664 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 HP1BP3Q5SSJ5 553 aaPredicted RBP19.89■□□□□ 0.77
CBX1-202ENST00000393408 MCEEQ96PE7 176 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 SENP1Q9P0U3 644 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 FBXO40Q9UH90 709 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 SMG5Q9UPR3 1016 aaKnown RBP19.89■□□□□ 0.77
CBX1-202ENST00000393408 STK38LQ9Y2H1 464 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 C15orf41Q9Y2V0 281 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 PHIPQ8WWQ0 1821 aa19.89■□□□□ 0.77
CBX1-202ENST00000393408 CCND1P24385 295 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 ARL2P36404 184 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 TXNRD3NBQ6F5E7 133 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 FBF1Q8TES7 1133 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 SPOCK2Q92563 424 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 NKD2Q969F2 451 aaPredicted RBP19.88■□□□□ 0.77
CBX1-202ENST00000393408 DHX33Q9H6R0 707 aaKnown RBP19.88■□□□□ 0.77
CBX1-202ENST00000393408 GRID1Q9ULK0 1009 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 PHTF1Q9UMS5 762 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 MOGSQ13724 837 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 WDR72Q3MJ13 1102 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 DNAJC24Q6P3W2 148 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 NSMCE1Q8WV22 266 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 MYLK2Q9H1R3 596 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 VPS37BQ9H9H4 285 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 SHOC2Q9UQ13 582 aa19.88■□□□□ 0.77
CBX1-202ENST00000393408 LSM8O95777 96 aaKnown RBP19.87■□□□□ 0.77
CBX1-202ENST00000393408 ITGAVP06756 1048 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 KRT15P19012 456 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 YARSP54577 528 aaKnown RBP19.87■□□□□ 0.77
CBX1-202ENST00000393408 PDK4Q16654 411 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 TFDP3Q5H9I0 405 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 ZBED8Q8IZ13 594 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 ZNF526Q8TF50 670 aaPredicted RBP19.87■□□□□ 0.77
CBX1-202ENST00000393408 SMC6Q96SB8 1091 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 VPS33BQ9H267 617 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 TXLNGQ9NUQ3 528 aa19.87■□□□□ 0.77
CBX1-202ENST00000393408 NOP53Q9NZM5 478 aaKnown RBP19.87■□□□□ 0.77
CBX1-202ENST00000393408 ZNF214Q9UL59 606 aaPredicted RBP19.87■□□□□ 0.77
CBX1-202ENST00000393408 DOCK1Q14185 1865 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms