RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NFIL3Q16649 462 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 SLC5A9Q2M3M2 681 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 LRRTM3Q86VH5 581 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 SPATA20Q8TB22 786 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 SPATA18Q8TC71 538 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZNF516Q92618 1163 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 FGF13Q92913 245 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 ANKRD36BP1Q96IX9 119 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 LRRC3Q9BY71 257 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 SMOC2Q9H3U7 446 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 CEP72Q9P209 647 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 CDH7Q9ULB5 785 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 L1RE1Q9UN81 338 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 TRAF3IP3Q9Y228 551 aa12.27□□□□□ -0.45
IGHV4-28-201ENST00000390612 VPS13AQ96RL7 3174 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 MOSPD3O75425 235 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 LRG1P02750 347 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 TMEM191BP0C7N4 346 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 DUSP4Q13115 394 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 PABPC1LQ4VXU2 614 aaKnown RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 GET4Q7L5D6 327 aaPredicted RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 METTL23Q86XA0 190 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 NPAS3Q8IXF0 933 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 TMEM86AQ8N2M4 240 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 GUF1Q8N442 669 aaKnown RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 PDCL2Q8N4E4 241 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 SLC44A3Q8N4M1 653 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 TOP6BLQ8N6T0 577 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 RSAD2Q8WXG1 361 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 PKMYT1Q99640 499 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 CGRRF1Q99675 332 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 DNAJC25Q9H1X3 360 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 POLIQ9UNA4 740 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 DUSP12Q9UNI6 340 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 YIPF1Q9Y548 306 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 CACNA1IQ9P0X4 2223 aa12.26□□□□□ -0.45
IGHV4-28-201ENST00000390612 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 WDR87Q6ZQQ6 2873 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 MYH10P35580 1976 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 STAU1O95793 577 aaKnown RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 TNNC2P02585 160 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 CCR2P41597 374 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 TWF1Q12792 350 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 SMARCB1Q12824 385 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 SOWAHAQ2M3V2 549 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 OSTM1Q86WC4 334 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 ELOA2Q8IYF1 753 aaPredicted RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 THEM5Q8N1Q8 247 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 TCEAL4Q96EI5 215 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 TIGD1Q96MW7 591 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 PGLYRP2Q96PD5 576 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 ACBD6Q9BR61 282 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 RPP25Q9BUL9 199 aaKnown RBP12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 GDE1Q9NZC3 331 aa12.25□□□□□ -0.45
IGHV4-28-201ENST00000390612 MAPK13O15264 365 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 EXOC3O60645 756 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 HUS1O60921 280 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 C4BPAP04003 597 aaKnown RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 NR3C1P04150 777 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 KRT19P08727 400 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 FAM163BP0C2L3 166 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 DLATP10515 647 aaKnown RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 TNNI1P19237 187 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 CASP4P49662 377 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 BFSP1Q12934 665 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 SLC39A12Q504Y0 691 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 COBLL1Q53SF7 1204 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 C1orf220Q5T0J3 134 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 PARM1Q6UWI2 310 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 TMC8Q8IU68 726 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 HS6ST3Q8IZP7 471 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 FBXL6Q8N531 539 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 C2orf15Q8WU43 125 aaKnown RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 KBTBD7Q8WVZ9 684 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 FGF14Q92915 247 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 CCDC47Q96A33 483 aaKnown RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 CCDC127Q96BQ5 260 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 HPDLQ96IR7 371 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZNF512Q96ME7 567 aaPredicted RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 FNBP1Q96RU3 617 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 CORO1BQ9BR76 489 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms