RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 ATAD1Q8NBU5 361 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 ZFYVE19Q96K21 471 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 RPF1Q9H9Y2 349 aaKnown RBP10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 GKN1Q9NS71 199 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 DSEQ9UL01 958 aa10.55□□□□□ -0.72
TRAV13-2-201ENST00000390439 USP24Q9UPU5 2620 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 TTC26A0AVF1 554 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 MTMR11A4FU01 709 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 EXTL3O43909 919 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 RHOBTB1O94844 696 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 MAPTP10636 758 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 SCP2P22307 547 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 AVPR1AP37288 418 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 AARSP49588 968 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 SPAG1Q07617 926 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 ZRSR1Q15695 479 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 MGAT5BQ3V5L5 792 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 RNF43Q68DV7 783 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 KBTBD6Q86V97 674 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 CD302Q8IX05 232 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 THEM5Q8N1Q8 247 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 C4orf32Q8N8J7 132 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 TMEM161BQ8NDZ6 487 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 LRRC3BQ96PB8 259 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 LLPHQ9BRT6 129 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 RUSC1Q9BVN2 902 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 LSM14BQ9BX40 385 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 LARSQ9P2J5 1176 aaKnown RBP10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 NCANO14594 1321 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 CEP295Q9C0D2 2601 aa10.54□□□□□ -0.72
TRAV13-2-201ENST00000390439 LACTBL1A8MY62 500 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 TRDMT1O14717 391 aaKnown RBP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 TM4SF5O14894 197 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 KCNK5O95279 499 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 VNN2O95498 520 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 DRD1P21728 446 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 DDX6P26196 483 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 PXNP49023 591 aaPredicted RBP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 LIG4P49917 911 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 LILRA4P59901 499 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 TNK2Q07912 1038 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 BFSP1Q12934 665 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 RUNX3Q13761 415 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 KARSQ15046 597 aaKnown RBP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 ZBTB6Q15916 424 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CCDC6Q16204 474 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 FBXO43Q4G163 708 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 TMEM196Q5HYL7 178 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 DAB2IPQ5VWQ8 1189 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CCDC26Q8TAB7 109 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 C2orf15Q8WU43 125 aaKnown RBP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 ZC3H10Q96K80 434 aaKnown RBP10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 SENP8Q96LD8 212 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 C2orf42Q9NWW7 574 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 LIMCH1Q9UPQ0 1083 aa10.53□□□□□ -0.72
TRAV13-2-201ENST00000390439 CITO14578 2027 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 OGTO15294 1046 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 MEFVO15553 781 aaPredicted RBP10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 PRAMEF12O95522 483 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 PROS1P07225 676 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 MPLP40238 635 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 PRPHP41219 470 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 CYP4F8P98187 520 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 MAPK7Q13164 816 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 PDGFRLQ15198 375 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 WDR44Q5JSH3 913 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 PLA2G2CQ5R387 149 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 SPATA1Q5VX52 437 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 SPPL2BQ8TCT7 592 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 FAM83CQ9BQN1 747 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 MKNK1Q9BUB5 465 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 SLC46A2Q9BY10 475 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 ATRXP46100 2492 aa10.52□□□□□ -0.73
TRAV13-2-201ENST00000390439 HNRNPDLO14979 420 aaKnown RBP10.51□□□□□ -0.73
TRAV13-2-201ENST00000390439 SOAT2O75908 522 aa10.51□□□□□ -0.73
TRAV13-2-201ENST00000390439 CAVIN2O95810 425 aa10.51□□□□□ -0.73
TRAV13-2-201ENST00000390439 CYP11A1P05108 521 aa10.51□□□□□ -0.73
TRAV13-2-201ENST00000390439 CDC25AP30304 524 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms