RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 PTCD3Q96EY7 689 aaKnown RBP4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 C8orf48Q96LL4 319 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 MLST8Q9BVC4 326 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 WDR11Q9BZH6 1224 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 SERHL2Q9H4I8 314 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 CASS4Q9NQ75 786 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 GEMIN8Q9NWZ8 242 aaKnown RBP4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 TPCN1Q9ULQ1 816 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 PLEKHM1Q9Y4G2 1056 aa4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-39P-201ENST00000384344 PIPSLA2A3N6 862 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 GOLIM4O00461 696 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 TRIAP1O43715 76 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ORC4O43929 436 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 RHOBTB3O94955 611 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 UNC5CO95185 931 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZBED1O96006 694 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 GRPP07492 148 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 PIM1P11309 404 aaPredicted RBP4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 XRCC6P12956 609 aaKnown RBP eCLIP4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZFP36P26651 326 aaKnown RBP4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC7A1P30825 629 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 DYRK1AQ13627 763 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 FHL2Q14192 279 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 LLGL1Q15334 1064 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 KIAA0753Q2KHM9 967 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 CRB2Q5IJ48 1285 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 LMBRD2Q68DH5 695 aaPredicted RBP4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 MICALCLQ6ZW33 695 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 DGKHQ86XP1 1220 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 CCAR1Q8IX12 1150 aaKnown RBP4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ULK2Q8IYT8 1036 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 PLBD2Q8NHP8 589 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 LRTOMTQ8WZ04 291 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ADAM2Q99965 735 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 HEPHQ9BQS7 1158 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 LRFN3Q9BTN0 628 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 LRRC27Q9C0I9 530 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 INTS13Q9NVM9 706 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZSCAN32Q9NX65 697 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 L1RE1Q9UN81 338 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 MED16Q9Y2X0 877 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 RAD54BQ9Y620 910 aa4.13□□□□□ -1.75
RNU6-39P-201ENST00000384344 A0A0B4J269 797 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 E9PLN8 166 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 F5H697 171 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 FRS3O43559 492 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 PEX1O43933 1283 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 TBC1D4O60343 1298 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 RAMP2O60895 175 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 VPS4BO75351 444 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SUN1O94901 812 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 KIF20AO95235 890 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 HRGP04196 525 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 KITP10721 976 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 CYP2C9P11712 490 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 HDCP19113 662 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 ACVRL1P37023 503 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZEB1P37275 1124 aaPredicted RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 NPTX2P47972 431 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 NDUFV1P49821 464 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 INHBCP55103 352 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 TGFB2P61812 414 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 TUBB3Q13509 450 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 RAB32Q13637 225 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 GRM3Q14832 879 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 IQCB1Q15051 598 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 CNN3Q15417 329 aaKnown RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 ERCC6LQ2NKX8 1250 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 LONRF3Q496Y0 759 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 CCDC181Q5TID7 509 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 LAIR1Q6GTX8 287 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 CHST15Q7LFX5 561 aaPredicted RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 KIAA0319LQ8IZA0 1049 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 ADGRG5Q8IZF4 528 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 Q8N1X5 172 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC16A11Q8NCK7 471 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 B3GALNT2Q8NCR0 500 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 PSD4Q8NDX1 1056 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 NSUN7Q8NE18 718 aaKnown RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 FAM46DQ8NEK8 389 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC9A6Q92581 669 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 LARP4BQ92615 738 aaKnown RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 COQ10AQ96MF6 247 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 VKORC1Q9BQB6 163 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 TMPRSS5Q9H3S3 457 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 UNKLQ9H9P5 680 aaKnown RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZMAT3Q9HA38 289 aaKnown RBP4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 DKK2Q9UBU2 259 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SHOC2Q9UQ13 582 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 TMX2Q9Y320 296 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
RNU6-39P-201ENST00000384344 PRSS29PA6NIE9 313 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 ISM1B1AKI9 464 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 TPP1O14773 563 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 ATXN1LP0C7T5 689 aaKnown RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 EGR2P11161 476 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 BRAFP15056 766 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 NPR1P16066 1061 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms