RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 IQSEC1Q6DN90 963 aa12.29□□□□□ -0.44
PITRM1-202ENST00000380989 PLPPR4Q7Z2D5 763 aa12.29□□□□□ -0.44
PITRM1-202ENST00000380989 UCMAQ8WVF2 138 aa12.29□□□□□ -0.44
PITRM1-202ENST00000380989 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
PITRM1-202ENST00000380989 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
PITRM1-202ENST00000380989 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
PITRM1-202ENST00000380989 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
PITRM1-202ENST00000380989 PDXKO00764 312 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 RASGRF2O14827 1237 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 CETN3O15182 167 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MYL3P08590 195 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 CACNB2Q08289 660 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 RNF220Q5VTB9 566 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 SRRM1Q8IYB3 904 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 SOCS4Q8WXH5 440 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 NOP53Q9NZM5 478 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 INTUQ9ULD6 942 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 KAT6AQ92794 2004 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 EIF3DO15371 548 aaKnown RBP eCLIP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MAFO75444 373 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 FGFR1OPO95684 399 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MAPTP10636 758 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 PYGMP11217 842 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 GTF2BQ00403 316 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 TAB3Q8N5C8 712 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 RNF149Q8NC42 400 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 RIPK2O43353 540 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 ARL2P36404 184 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 CCDC137Q6PK04 289 aaKnown RBP12.28□□□□□ -0.44
PITRM1-202ENST00000380989 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 ARMC2Q8NEN0 867 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 BICD1Q96G01 975 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 SYT15Q9BQS2 421 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 MINDY3Q9H8M7 445 aa12.28□□□□□ -0.44
PITRM1-202ENST00000380989 EXOC3O60645 756 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 AFPP02771 609 aaKnown RBP12.27□□□□□ -0.44
PITRM1-202ENST00000380989 IQCF3P0C7M6 154 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 PPP1R2P41236 205 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 DNAJC3Q13217 504 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.44
PITRM1-202ENST00000380989 DGKDQ16760 1214 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 EPC2Q52LR7 807 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 ECHDC2Q86YB7 292 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 SLC35C1Q96A29 364 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 IFT74Q96LB3 600 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 HERPUD2Q9BSE4 406 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 HAPLN2Q9GZV7 340 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.44
PITRM1-202ENST00000380989 CDC42EP4Q9H3Q1 356 aaKnown RBP12.27□□□□□ -0.44
PITRM1-202ENST00000380989 SUCLA2Q9P2R7 463 aaPredicted RBP12.27□□□□□ -0.44
PITRM1-202ENST00000380989 ALG6Q9Y672 507 aa12.27□□□□□ -0.44
PITRM1-202ENST00000380989 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 C22orf31O95567 290 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 PTENP60484 403 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 COPS2P61201 443 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 MARCH8Q5T0T0 291 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 DEPTORQ8TB45 409 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ZNF296Q8WUU4 475 aaPredicted RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 C9orf72Q96LT7 481 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ACCSQ96QU6 501 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ANKFY1Q9P2R3 1169 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 USP15Q9Y4E8 981 aaPredicted RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 O00370 1275 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 B4GALT5O43286 388 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ATP2A2P16615 1042 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 EPHB2P29323 1055 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 FOXN2P32314 431 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 EDRF1Q3B7T1 1238 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 HS2ST1Q7LGA3 356 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 TMEM130Q8N3G9 435 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 RASGEF1CQ8N431 466 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 MAB21L3Q8N8X9 362 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ALG13Q9NP73 1137 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 G3BP2Q9UN86 482 aaKnown RBP12.27□□□□□ -0.45
PITRM1-202ENST00000380989 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.45
PITRM1-202ENST00000380989 BHMG1C9JSJ3 638 aaPredicted RBP12.26□□□□□ -0.45
PITRM1-202ENST00000380989 IGHA2P01877 340 aa12.26□□□□□ -0.45
PITRM1-202ENST00000380989 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
PITRM1-202ENST00000380989 WNT7BP56706 349 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms