RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 VSNL1P62760 191 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 GOLGA7BQ2TAP0 167 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 OR8H2Q8N162 312 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 DCAF4Q8WV16 495 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 HDHD2Q9H0R4 259 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 INTS13Q9NVM9 706 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 KRT33AO76009 404 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 SRP72O76094 671 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 PDGFRAP16234 1089 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 PSMA3P25788 255 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 INAQ16352 499 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 DGKKQ5KSL6 1271 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 IQCF2Q8IXL9 164 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 SNRNP27Q8WVK2 155 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 CHMP2BQ9UQN3 213 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 ITGA3P26006 1051 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 ABCE1P61221 599 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 OLFM1Q99784 485 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 TMEM117Q9H0C3 514 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 CYP4F12Q9HCS2 524 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 GNG14A0A1W2PPG7 69 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 GGPS1O95749 300 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 GLB1LQ6UWU2 654 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 RAD54LQ92698 747 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 EML3Q32P44 896 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 IER5Q5VY09 327 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 TDRD10Q5VZ19 366 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 JPH1Q9HDC5 661 aaPredicted RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 RPRD1BQ9NQG5 326 aaKnown RBP12.97□□□□□ -0.33
CHD3-203ENST00000380358 CDYLQ9Y232 598 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 CYP51A1Q16850 503 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 MMGT1Q8N4V1 131 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 DDI1Q8WTU0 396 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 RELTQ969Z4 430 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 ADI1Q9BV57 179 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 RHOBTB2Q9BYZ6 727 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 NEDD4P46934 1319 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 EVPLLA8MZ36 301 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 FAM25AB3EWG3 89 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 FAM25CB3EWG5 89 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 FAM25GB3EWG6 89 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 TDP2O95551 362 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 CKMP06732 381 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 ATP6V1B1P15313 513 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 CNOT7Q9UIV1 285 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 SPACA6W5XKT8 324 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 CLCN6P51797 869 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 ALCAMQ13740 583 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 SCP2P22307 547 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 EIF3BP55884 814 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 ALKBH4Q9NXW9 302 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 RNF112Q9ULX5 631 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 SRPRBQ9Y5M8 271 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 EGFRP00533 1210 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 RGS4P49798 205 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 UTS2BQ765I0 119 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 SETD3Q86TU7 594 aaPredicted RBP12.96□□□□□ -0.33
CHD3-203ENST00000380358 LONP2Q86WA8 852 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 RNF14Q9UBS8 474 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 TSC22D4Q9Y3Q8 395 aa12.96□□□□□ -0.33
CHD3-203ENST00000380358 M0R3G1 203 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 DEAF1O75398 565 aaPredicted RBP12.96□□□□□ -0.34
CHD3-203ENST00000380358 SNX17Q15036 470 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.34
CHD3-203ENST00000380358 SH3GL1Q99961 368 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 TMEM47Q9BQJ4 181 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 KIFC1Q9BW19 673 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 TRIM13O60858 407 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 LRRC63Q05C16 580 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 EFCAB12Q6NXP0 572 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 CNDP1Q96KN2 507 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.34
CHD3-203ENST00000380358 ZNF185O15231 689 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 ZNF682O95780 498 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 P4HBP07237 508 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms