RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 MARK2Q7KZI7 788 aaKnown RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 PDCD7Q8N8D1 485 aaKnown RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 JADE3Q92613 823 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 STN1Q9H668 368 aaKnown RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 NDE1Q9NXR1 346 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 HEY2Q9UBP5 337 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 IQANK1A0A1B0GTG1 560 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 FAM86B1E9PN63 330 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 LIASO43766 372 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 GRIN3BO60391 1043 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 RPS6KA4O75676 772 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 TM7SF2O76062 418 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 LYPLA2O95372 231 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 FAM86B2P0C5J1 330 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 CPA3P15088 417 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 PGM1P36871 562 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 GTF2BQ00403 316 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 ZBTB16Q05516 673 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 PPP3CAQ08209 521 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 SNX1Q13596 522 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 GRM2Q14416 872 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 TBC1D25Q3MII6 688 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 PABPC1LQ4VXU2 614 aaKnown RBP8.65□□□□□ -1.03
PTPRR-203ENST00000378778 ZC2HC1CQ53FD0 456 aaPredicted RBP8.65□□□□□ -1.03
PTPRR-203ENST00000378778 RASIP1Q5U651 963 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 POTEAQ6S8J7 498 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 ZNF276Q8N554 614 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 BANPQ8N9N5 519 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 KLHL23Q8NBE8 558 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 NRG4Q8WWG1 115 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 TEKT1Q969V4 418 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 POM121Q96HA1 1249 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 C9orf72Q96LT7 481 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 RIT2Q99578 217 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 FRMD8Q9BZ67 464 aaPredicted RBP8.65□□□□□ -1.03
PTPRR-203ENST00000378778 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 NPHS2Q9NP85 383 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 SLCO1B3Q9NPD5 702 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 MKS1Q9NXB0 559 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 DDX56Q9NY93 547 aaKnown RBP8.65□□□□□ -1.03
PTPRR-203ENST00000378778 PLK2Q9NYY3 685 aa8.65□□□□□ -1.03
PTPRR-203ENST00000378778 COL16A1Q07092 1604 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 E7ESA3 106 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 CYP26A1O43174 497 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 PEX1O43933 1283 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 SPAG7O75391 227 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 KRT36O76013 467 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ECE1P42892 770 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 SERPINB4P48594 390 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ARL4CP56559 192 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ACTR3P61158 418 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 TAP1Q03518 808 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 SLC18A2Q05940 514 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ASPHQ12797 758 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 PRKD1Q15139 912 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 DDB1Q16531 1140 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 CNPY1Q3B7I2 92 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 C1orf220Q5T0J3 134 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 SLFN13Q68D06 897 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 DSTYKQ6XUX3 929 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 UCMAQ8WVF2 138 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 DYDC2Q96IM9 177 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 C7orf26Q96N11 449 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 BTBD9Q96Q07 612 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 NDNQ99608 321 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 KRT82Q9NSB4 513 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ARL8BQ9NVJ2 186 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 TAS2R1Q9NYW7 299 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 HSPBP1Q9NZL4 362 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 DAGLAQ9Y4D2 1042 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 SCN4AP35499 1836 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 FAM196BA6NMK8 535 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 CYP1A1P04798 512 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 CCDC166P0CW27 439 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 RALAP11233 206 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ANPEPP15144 967 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 RGS2P41220 211 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 MAP3K10Q02779 954 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 COG2Q14746 738 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 WDR72Q3MJ13 1102 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 RNASEH2BQ5TBB1 312 aaKnown RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 FOXB2Q5VYV0 432 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 ATG16L1Q676U5 607 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 NIPA1Q7RTP0 329 aa8.64□□□□□ -1.03
PTPRR-203ENST00000378778 PHF13Q86YI8 300 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-203ENST00000378778 TPH2Q8IWU9 490 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms