RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TSPAN3O60637 253 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 ZC3H11AO75152 810 aaKnown RBP eCLIP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 RTN2O75298 545 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 OR4Q2P0C623 313 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 GOLGA7BQ2TAP0 167 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 DENND1BQ6P3S1 775 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 PALM2Q8IXS6 379 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 ZBED8Q8IZ13 594 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 C4orf33Q8N1A6 199 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 USP38Q8NB14 1042 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 PPP1R36Q96LQ0 422 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 TTYH3Q9C0H2 523 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 ABI2Q9NYB9 513 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 PCDHB2Q9Y5E7 798 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 SYNGAP1Q96PV0 1343 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 POLR2AP24928 1970 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 A6NJR5 290 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CXCL11O14625 94 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 APRTP07741 180 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 ARSEP51690 589 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 SESN2P58004 480 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 LAMC2Q13753 1193 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 MEA1Q16626 185 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 BEND6Q5SZJ8 279 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CCNI2Q6ZMN8 369 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 ELOA2Q8IYF1 753 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 FAM71DQ8N9W8 422 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CFAP57Q96MR6 1250 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 NAP1L3Q99457 506 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 NIF3L1Q9GZT8 377 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 IQCGQ9H095 443 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 TMEM51Q9NW97 253 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 FAM8A1Q9UBU6 413 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 NID2Q14112 1375 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 ZMYM2Q9UBW7 1377 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 EIF4E1BA6NMX2 242 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 RFC1P35251 1148 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 NT5C2P49902 561 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 FMO1Q01740 532 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 COL9A2Q14055 689 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 TXNRD3NBQ6F5E7 133 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 NPNTQ6UXI9 565 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 PDCD6IPQ8WUM4 868 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 MAFGO15525 162 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 USP12O75317 370 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 FDX1P10109 184 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 SCNN1GP51170 649 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 EPHB4P54760 987 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 HNRNPH2P55795 449 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 MAP3K7CLP57077 242 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 BPIFB4P59827 614 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 GTF2BQ00403 316 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CDR2Q01850 454 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 IFT88Q13099 833 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 HADHQ16836 314 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 P3H1Q32P28 736 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 ZNF618Q5T7W0 954 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 TMCO2Q7Z6W1 182 aaPredicted RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 RHOT2Q8IXI1 618 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CCDC13Q8IYE1 715 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 DNAAF3Q8N9W5 541 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 DDX23Q9BUQ8 820 aaKnown RBP8.56□□□□□ -1.04
CKAP2-203ENST00000378037 RAB17Q9H0T7 212 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CTNNAL1Q9UBT7 734 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 PNMA2Q9UL42 364 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
CKAP2-203ENST00000378037 CCDC195A0A1B0GUA6 201 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 GOLGA8KD6RF30 607 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 E5RJQ4 531 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 GOLGA8TH3BQL2 631 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 IGF2BP3O00425 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CLTAP09496 248 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 EFNA5P52803 228 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 AP1B1Q10567 949 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CRHR2Q13324 411 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SLC29A2Q14542 456 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 TERF2Q15554 542 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CES3Q6UWW8 571 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 USP50Q70EL3 339 aaPredicted RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 JAMLQ86YT9 394 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 EFCAB13Q8IY85 973 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MSANTD4Q8NCY6 345 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
CKAP2-203ENST00000378037 PCYT2Q99447 389 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 CAPS2Q9BXY5 557 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 OSBPL8Q9BZF1 889 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 ATXN3LQ9H3M9 355 aa8.55□□□□□ -1.04
CKAP2-203ENST00000378037 SEMA4AQ9H3S1 761 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms