RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 LGALS13Q9UHV8 139 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ANP32DO95626 131 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 OPTNQ96CV9 577 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 EIF2AK1Q9BQI3 630 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DESI2Q9BSY9 194 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 IRX2Q9BZI1 471 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 C5orf60A6NFR6 353 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TOM1L1O75674 476 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ALKQ9UM73 1620 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 STX3Q13277 289 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DDX43Q9NXZ2 648 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 IRF2BP2Q7Z5L9 587 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 RPF1Q9H9Y2 349 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CHADO15335 359 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MRPS14O60783 128 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 VDRP11473 427 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 COPAP53621 1224 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 EIF2B5Q13144 721 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TOP3AQ13472 1001 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PADI6Q6TGC4 694 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF75CPQ92670 426 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MROH8Q9H579 483 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 HMGXB4Q9UGU5 601 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PDHBP11177 359 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SLC29A2Q14542 456 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 FAM133AQ8N9E0 248 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 C7orf26Q96N11 449 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PRMT7Q9NVM4 692 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PADI4Q9UM07 663 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MPOP05164 745 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TGS1Q96RS0 853 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 RNPEPL1Q9HAU8 725 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 KCTD5Q9NXV2 234 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 H0Y3Z8 333 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DEFA1P59665 94 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DEFA3P59666 94 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PRKG1Q13976 671 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TAB1Q15750 504 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF667Q5HYK9 610 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 KIAA0408Q6ZU52 694 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CKAP2Q8WWK9 683 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CEP170P1Q96L14 293 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 KDM1AO60341 852 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ANXA11P50995 505 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 GUCY2FP51841 1108 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 WLSQ5T9L3 541 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ADGRF4Q8IZF3 695 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ARHGEF26Q96DR7 871 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TCF12Q99081 682 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 SPATA31A6Q5VVP1 1343 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ITGB3BPQ13352 177 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 RNF207Q6ZRF8 634 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 USHBP1Q8N6Y0 703 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TEKT4Q8WW24 435 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KDM6BO15054 1643 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PGM1P36871 562 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 GTF2BQ00403 316 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 COASYQ13057 564 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CNGA2Q16280 664 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TRIM69Q86WT6 500 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 BLZF1Q9H2G9 400 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZCCHC17Q9NP64 241 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 COL3A1P02461 1466 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 INHBEP58166 350 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 USH1GQ495M9 461 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 FAM84AQ96KN4 292 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MSTO1Q9BUK6 570 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MLXIPQ9HAP2 919 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HSPA1LP34931 641 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF564Q8TBZ8 553 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KIAA1683Q9H0B3 1180 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MAN1A2O60476 641 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PSMA3P25788 255 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 GALCP54803 685 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NAPEPLDQ6IQ20 393 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 FAM81AQ8TBF8 368 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 OLFM1Q99784 485 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ASPSCR1Q9BZE9 553 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TNS3Q68CZ2 1445 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 M0R2C6 588 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 DDHD2O94830 711 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PTX3P26022 381 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CYP27A1Q02318 531 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 METTL23Q86XA0 190 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MRPL48Q96GC5 212 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CNOT8Q9UFF9 292 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CLPTM1O96005 669 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZDHHC20Q5W0Z9 365 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 GMEB1Q9Y692 573 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 AK5Q9Y6K8 562 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TEX33O43247 280 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MAGEA8P43361 318 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HCAR3P49019 387 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KRT81Q14533 505 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KCTD2Q14681 263 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 STOX1Q6ZVD7 989 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms