RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 HNRNPH2P55795 449 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 CCZ1BP86790 482 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CCZ1P86791 482 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 BHLHB9Q6PI77 547 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ZNF410Q86VK4 478 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ENGASEQ8NFI3 743 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 SEPT8Q92599 483 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PLIN2Q99541 437 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 MRPS26Q9BYN8 205 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ATAD3AQ9NVI7 634 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 C2orf81A6NN90 581 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 AREL1O15033 823 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 SOAT2O75908 522 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ALDH1A2O94788 518 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 EPHA7Q15375 998 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 HIST2H2ACQ16777 129 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 HIST2H2AA3Q6FI13 130 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 TAGAPQ8N103 731 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 SETD9Q8NE22 299 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 N4BP2L2Q92802 583 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 RANBP17Q9H2T7 1088 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 PDGFCQ9NRA1 345 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 NEMP1O14524 444 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ARIH2O95376 493 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PPP2R1BP30154 601 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 IRX5P78411 483 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 CDK16Q00536 496 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 MRPL28Q13084 256 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 TAB1Q15750 504 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 ZNF484Q5JVG2 852 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 SDE2Q6IQ49 451 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 GMCL1Q96IK5 515 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CTNNAL1Q9UBT7 734 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 GRIN2DO15399 1336 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PIGBOS1A0A0B4J2F0 54 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 FGF10O15520 208 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 BRD2P25440 801 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 LTKP29376 864 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CRKP46108 304 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PTH1RQ03431 593 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 LZTR1Q8N653 840 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CAMKK2Q96RR4 588 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 CNOT8Q9UFF9 292 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 GGA2Q9UJY4 613 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PRR23D1E9PI22 279 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 UBXN8O00124 270 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PRR23D2P0DMB1 279 aaPredicted RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 NAB2Q15742 525 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 RRM2BQ7LG56 351 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
CUBN-202ENST00000377833 MGARPQ8TDB4 240 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 OSBPL8Q9BZF1 889 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 KANSL3Q9P2N6 904 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
CUBN-202ENST00000377833 COL3A1P02461 1466 aaPredicted RBP6.27□□□□□ -1.41
CUBN-202ENST00000377833 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 AGAP9Q5VTM2 703 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 NCKIPSDQ9NZQ3 722 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 UXTQ9UBK9 157 aaPredicted RBP6.27□□□□□ -1.41
CUBN-202ENST00000377833 ACTL7BQ9Y614 415 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 MYPNQ86TC9 1320 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 FGF19O95750 216 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 MYL2P10916 166 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 TNFRSF8P28908 595 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 CASP2P42575 452 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 HARS2P49590 506 aaKnown RBP6.27□□□□□ -1.41
CUBN-202ENST00000377833 ACTR2P61160 394 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 CYLC2Q14093 348 aaPredicted RBP6.27□□□□□ -1.41
CUBN-202ENST00000377833 AVL9Q8NBF6 648 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 PGBD1Q96JS3 809 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 RBM15Q96T37 977 aaKnown RBP eCLIP6.27□□□□□ -1.41
CUBN-202ENST00000377833 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 PNMA8CA0A1B0GUJ8 204 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 GUCY1B2O75343 617 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 WDR60Q8WVS4 1066 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 OSBPL10Q9BXB5 764 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 OSBPL1AQ9BXW6 950 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 FBXO44Q9H4M3 255 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 STMN3Q9NZ72 180 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 MBD2Q9UBB5 411 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 VPS26AO75436 327 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 MARK3P27448 753 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 CDK7P50613 346 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 GPS1Q13098 491 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 EMC2Q15006 297 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 BBS9Q3SYG4 887 aa6.27□□□□□ -1.41
CUBN-202ENST00000377833 FAM102AQ5T9C2 384 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms