RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 STAMBPL1Q96FJ0 436 aa19.85■□□□□ 0.77
TBC1D4-201ENST00000377625 HPDLQ96IR7 371 aa19.85■□□□□ 0.77
TBC1D4-201ENST00000377625 PDLIM2Q96JY6 352 aa19.85■□□□□ 0.77
TBC1D4-201ENST00000377625 USP15Q9Y4E8 981 aaPredicted RBP19.85■□□□□ 0.77
TBC1D4-201ENST00000377625 USP42Q9H9J4 1324 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 RPA1P27694 616 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 PLA2G4AP47712 749 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 SERPINB10P48595 397 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 NLRP11P59045 1033 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 DYNC1I2Q13409 638 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 NOTUMQ6P988 496 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 PHF21AQ96BD5 680 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 PAWRQ96IZ0 340 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 AGBL1Q96MI9 1066 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 APOL5Q9BWW9 433 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 KCNH7Q9NS40 1196 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 SNRPAP09012 282 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 C10orf120Q5SQS8 335 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 ICE2Q659A1 982 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 E4F1Q66K89 784 aaPredicted RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 ZNF473Q8WTR7 871 aaKnown RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 FOXP3Q9BZS1 431 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 ZCWPW1Q9H0M4 648 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 ZNF677Q86XU0 584 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 KCNK16Q96T55 309 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 TTC39BQ5VTQ0 682 aaPredicted RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 FAM129AQ9BZQ8 928 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 CCL15-CCL14A0A0B4J2E2 113 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 CCL15Q16663 113 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 ZRANB3Q5FWF4 1079 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 MKNK1Q9BUB5 465 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 SMARCAL1Q9NZC9 954 aa19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 MORC2Q9Y6X9 1032 aaPredicted RBP19.84■□□□□ 0.77
TBC1D4-201ENST00000377625 BRD2P25440 801 aaKnown RBP19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 SOX11P35716 441 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 ALDH1A3P47895 512 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 LRRC36Q1X8D7 754 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 EPC2Q52LR7 807 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 OR2W6PQ8NHA6 318 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 PHF20L1A8MW92 1017 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 AIM2O14862 343 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 P4HA2O15460 535 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 RBP3P10745 1247 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 CCZ1BP86790 482 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 CCZ1P86791 482 aaPredicted RBP19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 TMEM39BQ9GZU3 492 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 RAD51CO43502 376 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 ITGA8P53708 1063 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 CYP4A22Q5TCH4 519 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 CCNI2Q6ZMN8 369 aaPredicted RBP19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 FEZF2Q8TBJ5 459 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 FAM162AQ96A26 154 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 SLITRK1Q96PX8 696 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 KLF6Q99612 283 aaPredicted RBP19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 VIPAS39Q9H9C1 493 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 ALG6Q9Y672 507 aa19.83■□□□□ 0.77
TBC1D4-201ENST00000377625 SMAPO00193 183 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 CLASP2O75122 1294 aaKnown RBP19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 CHRM3P20309 590 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 MTM1Q13496 603 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 EME1Q96AY2 570 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 KLHL2O95198 593 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 PCYT1AP49585 367 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 PTK6Q13882 451 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 GNASQ5JWF2 1037 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 USP49Q70CQ1 688 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 TARS2Q9BW92 718 aaKnown RBP19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 SPATA16Q9BXB7 569 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 MYOZ2Q9NPC6 264 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 ANKEF1Q9NU02 776 aa19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 SCAF8Q9UPN6 1271 aaKnown RBP19.83■□□□□ 0.76
TBC1D4-201ENST00000377625 RRN3P2A6NIE6 340 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 TBC1D4O60343 1298 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 FAM200BP0CF97 657 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CENPCQ03188 943 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 KYNUQ16719 465 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 SGO1Q5FBB7 561 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 SETD1BQ9UPS6 1966 aaKnown RBP19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 A0A1W2PQJ5 194 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 KRT87PA6NCN2 255 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 C16orf96A6NNT2 1141 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CSF1RP07333 972 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CETPP11597 493 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 PTGER2P43116 358 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 KLK7P49862 253 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 GMPSP49915 693 aaPredicted RBP19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 ATXN3P54252 364 aaPredicted RBP19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 NPEPPSP55786 919 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 BTN2A2Q8WVV5 523 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 PLEKHA8Q96JA3 519 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CCT8L2Q96SF2 557 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CNTNAP5Q8WYK1 1306 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 FXR2P51116 673 aaKnown RBP eCLIP19.82■□□□□ 0.767e-7■■■□□ 15
TBC1D4-201ENST00000377625 KLHDC7AQ5VTJ3 777 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 XRRA1Q6P2D8 792 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 CLEC17AQ6ZS10 378 aa19.82■□□□□ 0.76
TBC1D4-201ENST00000377625 FAM71DQ8N9W8 422 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms