RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 CCNYL1Q8N7R7 359 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 DCLK3Q9C098 648 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 DENND2DQ9H6A0 471 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 C10orf88Q9H8K7 445 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 PKD2L2Q9NZM6 624 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 APPL1Q9UKG1 709 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 AP4S1Q9Y587 144 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 UBE4BO95155 1302 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 K7ERI5 159 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 RBP3P10745 1247 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 VEGFAP15692 232 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 IL10P22301 178 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 PRPSAP1Q14558 356 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 FBXO36Q8NEA4 188 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 TMA16Q96EY4 203 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 ZNF570Q96NI8 536 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 NUDT12Q9BQG2 462 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 STX18Q9P2W9 335 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 BAG5Q9UL15 447 aa9.49□□□□□ -0.89
CRNKL1-201ENST00000377327 CST8O60676 142 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ZNF189O75820 626 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 LDHAP00338 332 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 AKR1B1P15121 316 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 LRRC8EQ6NSJ5 796 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 TRIM74Q86UV6 250 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 TRIM73Q86UV7 250 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 USP6NLQ92738 828 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ITFG2Q969R8 447 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 LENG1Q96BZ8 264 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ADPGKQ9BRR6 497 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 KCND2Q9NZV8 630 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ITGB1BP2Q9UKP3 347 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 MAGED2Q9UNF1 606 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 AFG3L2Q9Y4W6 797 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 NUB1Q9Y5A7 615 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CDY2AQ9Y6F7 541 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CDY1Q9Y6F8 540 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RIMBP3CA6NJZ7 1639 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RIMBP3BA6NNM3 1639 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RIMBP3Q9UFD9 1639 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 HNRNPRO43390 633 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 EDF1O60869 148 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SRGAP2CP0DJJ0 459 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SRGAP2BP0DMP2 458 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 TAC1P20366 129 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 PTK6Q13882 451 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 MAPRE2Q15555 327 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SNRNP35Q16560 246 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 LIN52Q52LA3 116 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ARMC3Q5W041 872 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SCARA5Q6ZMJ2 495 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 C4orf50Q6ZRC1 276 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 LPCAT2Q7L5N7 544 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CASP10Q92851 521 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ZNF317Q96PQ6 595 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ECSITQ9BQ95 431 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 MSTO1Q9BUK6 570 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 KIFC3Q9BVG8 833 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 EIF2AQ9BY44 585 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 C20orf96Q9NUD7 363 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SEPT3Q9UH03 358 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ZNF229Q9UJW7 825 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 NEMP1O14524 444 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 DEAF1O75398 565 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 GDF11O95390 407 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 PGM3O95394 542 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 GH1P01241 217 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ANPEPP15144 967 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 VAV1P15498 845 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CYP11B1P15538 503 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 TCN1P20061 433 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 QARSP47897 775 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CHN2P52757 468 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CDH6P55285 790 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 IL1RL1Q01638 556 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 PIGHQ14442 188 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RSPH3Q86UC2 560 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 ANKRD36BP1Q96IX9 119 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 L3MBTL3Q96JM7 780 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 RUSC1Q9BVN2 902 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 JMJD4Q9H9V9 463 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 CHST7Q9NS84 486 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.48□□□□□ -0.89
CRNKL1-201ENST00000377327 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
CRNKL1-201ENST00000377327 PIK3R2O00459 728 aa9.47□□□□□ -0.89
CRNKL1-201ENST00000377327 AKAP10O43572 662 aa9.47□□□□□ -0.89
CRNKL1-201ENST00000377327 GJB6O95452 261 aa9.47□□□□□ -0.89
CRNKL1-201ENST00000377327 CASP2P42575 452 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms