RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 PCDHB7Q9Y5E2 793 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 A0A087X0T9 212 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 TRIM43BA6NCK2 446 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 USP27XA6NNY8 438 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 DDX3XO00571 662 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSX9-201ENST00000376909 PODXLO00592 558 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 HOXA2O43364 376 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 POMCP01189 267 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 FAM228BP0C875 321 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 RAG1P15918 1043 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 MAGEA1P43355 309 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 RAP1GAPP47736 663 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 TAF6P49848 677 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 AFF1P51825 1210 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 ZNF132P52740 706 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 CDH8P55286 799 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 IKBKEQ14164 716 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 NAB2Q15742 525 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 TCTN1Q2MV58 587 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 NOMO2Q5JPE7 1267 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 CLLU1OSQ5K130 101 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 CCDC122Q5T0U0 273 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 C10orf76Q5T2E6 689 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 TAF3Q5VWG9 929 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 NOP9Q86U38 636 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 SLC47A2Q86VL8 602 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 ZNF677Q86XU0 584 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 REXO1L1PQ8IX06 675 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 RPUSD2Q8IZ73 545 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 SLC30A5Q8TAD4 765 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 LNX1Q8TBB1 728 aaPredicted RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 EPS8L1Q8TE68 723 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SLC20A1Q8WUM9 679 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 UROC1Q96N76 676 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SYT11Q9BT88 431 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SDCBP2Q9H190 292 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SMYD3Q9H7B4 428 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SEPT11Q9NVA2 429 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 GDAP2Q9NXN4 497 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 NOCTQ9UK39 431 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 REXO2Q9Y3B8 237 aaKnown RBP8.3□□□□□ -1.08
SSX9-201ENST00000376909 PCDHA13Q9Y5I0 950 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 SNX9Q9Y5X1 595 aa8.3□□□□□ -1.08
SSX9-201ENST00000376909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.29□□□□□ -1.08
SSX9-201ENST00000376909 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 KPNA7A9QM74 516 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ZNF263O14978 683 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 HUS1O60921 280 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 CILPO75339 1184 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 MMEP08473 750 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 PAEPP09466 180 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 FGFR1P11362 822 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 CHRNB2P17787 502 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 PAX3P23760 479 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 GNA15P30679 374 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 CLCNKBP51801 687 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 VAV2P52735 878 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 LILRA4P59901 499 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 CDR2Q01850 454 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 TUSC3Q13454 348 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 UPP1Q16831 310 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ARHGAP29Q52LW3 1261 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ZNF394Q53GI3 561 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ALKBH5Q6P6C2 394 aaKnown RBP8.29□□□□□ -1.08
SSX9-201ENST00000376909 ZNF662Q6ZS27 426 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 NPAS4Q8IUM7 802 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 TMEM199Q8N511 208 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 DDX1Q92499 740 aaKnown RBP8.29□□□□□ -1.08
SSX9-201ENST00000376909 TSGA10Q9BZW7 698 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 PDCL3Q9H2J4 239 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 ACP6Q9NPH0 428 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 PUF60Q9UHX1 559 aaKnown RBP8.29□□□□□ -1.08
SSX9-201ENST00000376909 NAGPAQ9UK23 515 aa8.29□□□□□ -1.08
SSX9-201ENST00000376909 BARX2Q9UMQ3 279 aaPredicted RBP8.29□□□□□ -1.08
SSX9-201ENST00000376909 DNAH12Q6ZR08 3092 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 ABHD14A-ACY1A0A1B0GW23 586 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 CYB561D2O14569 222 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 SPTLC1O15269 473 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 THAP12O43422 761 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 TACC1O75410 805 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 ZMYND10O75800 440 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 CALCAP01258 141 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 PFKMP08237 780 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 FAM163BP0C2L3 166 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 ITGB8P26012 769 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 GGCXP38435 758 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 ARHGAP25P42331 645 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 RAD23BP54727 409 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 FMO1Q01740 532 aa8.28□□□□□ -1.08
SSX9-201ENST00000376909 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
SSX9-201ENST00000376909 INCA1Q0VD86 236 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms