RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 CCDC142Q17RM4 750 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 ALYREFQ86V81 257 aaKnown RBP23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 MYLK4Q86YV6 388 aaPredicted RBP23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 RBM12BQ8IXT5 1001 aaKnown RBP23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 CCDC110Q8TBZ0 833 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 PPP2R3CQ969Q6 453 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 OXNAD1Q96HP4 312 aaPredicted RBP23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 IWS1Q96ST2 819 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 NMUR2Q9GZQ4 415 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 SSU72Q9NP77 194 aaKnown RBP23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 SEL1LQ9UBV2 794 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 PPM1HQ9ULR3 514 aa23.19■■□□□ 1.3
SYNDIG1-201ENST00000376862 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 DLDP09622 509 aaKnown RBP23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 CD58P19256 250 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 RAPH1Q70E73 1250 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 STKLD1Q8NE28 680 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 DDX1Q92499 740 aaKnown RBP23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 SEMA4DQ92854 862 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 CBWD1Q9BRT8 395 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 MAGEC1O60732 1142 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 OPHN1O60890 802 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 MYL2P10916 166 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 MXI1P50539 228 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 RASA2Q15283 850 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 MDH1BQ5I0G3 518 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 DPY19L2Q6NUT2 758 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 NET1Q7Z628 596 aaPredicted RBP23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 SPATA24Q86W54 205 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 DHX38Q92620 1227 aaKnown RBP23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 HIC2Q96JB3 615 aa23.18■■□□□ 1.3
SYNDIG1-201ENST00000376862 P4HA2O15460 535 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 ENO1P06733 434 aaKnown RBP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 GEMIN4P57678 1058 aaKnown RBP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 TAS2R40P59535 323 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 GPX6P59796 221 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 GPS1Q13098 491 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 CLEC16AQ2KHT3 1053 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 EFHC2Q5JST6 749 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 SCUBE1Q8IWY4 988 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 SMC1BQ8NDV3 1235 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 VPS11Q9H270 941 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 ALOX15BO15296 676 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 HNRNPRO43390 633 aaKnown RBP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 SREBF1P36956 1147 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 ARSEP51690 589 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 MFAP3P55082 362 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 AP2B1P63010 937 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 SLC25A41Q8N5S1 370 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 RBM15BQ8NDT2 890 aaKnown RBP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 NGLY1Q96IV0 654 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 RANBP17Q9H2T7 1088 aaKnown RBP23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 DNPEPQ9ULA0 475 aa23.17■■□□□ 1.3
SYNDIG1-201ENST00000376862 GOLGA8SH3BPF8 625 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 GOLGA8MH3BSY2 632 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 PABPC4LP0CB38 370 aaKnown RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 FAM200BP0CF97 657 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 HARSP12081 509 aaKnown RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 VAV1P15498 845 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 TM4SF1P30408 202 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 ZNF76P36508 570 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 USH1GQ495M9 461 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 TREML1Q86YW5 311 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 BANPQ8N9N5 519 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 PLEKHG4BQ96PX9 1271 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 KLHL11Q9NVR0 708 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 WRAP73Q9P2S5 460 aaPredicted RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 RABGEF1Q9UJ41 708 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 COL5A3P25940 1745 aaPredicted RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 FAM237BA0A1B0GVD1 139 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 K7ENM7 598 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 BUD23O43709 281 aaKnown RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 SLURP2P0DP57 97 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 HOXA13P31271 388 aaPredicted RBP23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 STRA6Q9BX79 667 aa23.16■■□□□ 1.3
SYNDIG1-201ENST00000376862 TM9SF1O15321 606 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 CIB2O75838 187 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 OR6B1O95007 311 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ASLP04424 464 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 BGNP21810 368 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 TFDP1Q14186 410 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 DLGAP5Q15398 846 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ACAD11Q709F0 780 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 TMPRSS6Q8IU80 811 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 NMD3Q96D46 503 aaKnown RBP23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 TUFT1Q9NNX1 390 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ZNF148Q9UQR1 794 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 CLUHO75153 1309 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 COQ9O75208 318 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 SSTR1P30872 391 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ACTR3P61158 418 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 DEUP1Q05D60 604 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 NFIXQ14938 502 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 PRKD1Q15139 912 aaPredicted RBP23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 KAZNQ674X7 775 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 SATL1Q86VE3 508 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 ULK2Q8IYT8 1036 aa23.15■■□□□ 1.3
SYNDIG1-201ENST00000376862 MCOLN2Q8IZK6 566 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms