RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 XYLT2Q9H1B5 865 aa22.61■■□□□ 1.21
HLA-C-201ENST00000376228 RGS18Q9NS28 235 aa22.61■■□□□ 1.21
HLA-C-201ENST00000376228 PCDHB2Q9Y5E7 798 aa22.61■■□□□ 1.21
HLA-C-201ENST00000376228 PCDHGC5Q9Y5F6 944 aa22.61■■□□□ 1.21
HLA-C-201ENST00000376228 CAPN6Q9Y6Q1 641 aa22.61■■□□□ 1.21
HLA-C-201ENST00000376228 ATICP31939 592 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 GATMP50440 423 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 MYL6P60660 151 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 TCEAL1Q15170 157 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 JADE1Q6IE81 842 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 SLC47A2Q86VL8 602 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 NPAS4Q8IUM7 802 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 CRIPAKQ8N1N5 446 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 CXorf38Q8TB03 319 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 SLC20A1Q8WUM9 679 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 CALR3Q96L12 384 aaKnown RBP22.6■■□□□ 1.21
HLA-C-201ENST00000376228 NIF3L1Q9GZT8 377 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 RC3H2Q9HBD1 1191 aaKnown RBP22.6■■□□□ 1.21
HLA-C-201ENST00000376228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.6■■□□□ 1.212e-6■■■■■ 149.1
HLA-C-201ENST00000376228 LRFN2Q9ULH4 789 aa22.6■■□□□ 1.21
HLA-C-201ENST00000376228 NCANO14594 1321 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 ANKRD62A6NC57 917 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 DGKIO75912 1065 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 MOCS3O95396 460 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 NPTXRO95502 500 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 STAU1O95793 577 aaKnown RBP22.59■■□□□ 1.21
HLA-C-201ENST00000376228 NFICP08651 508 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 PRLRP16471 622 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 GALCP54803 685 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 ERVK-21P61565 698 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 FMO1Q01740 532 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 DSC3Q14574 896 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 PAN2Q504Q3 1202 aaKnown RBP22.59■■□□□ 1.21
HLA-C-201ENST00000376228 MICALL1Q8N3F8 863 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 ARID3AQ99856 593 aa22.59■■□□□ 1.21
HLA-C-201ENST00000376228 FAM124BQ9H5Z6 455 aaPredicted RBP22.59■■□□□ 1.21
HLA-C-201ENST00000376228 C9IYK1 514 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 DYNC1I1O14576 645 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 RTN2O75298 545 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 TMEM132DQ14C87 1099 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 CCDC85BQ15834 202 aaPredicted RBP22.58■■□□□ 1.21
HLA-C-201ENST00000376228 SLC24A5Q71RS6 500 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 C1orf127Q8N9H9 656 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 ZNF689Q96CS4 500 aaPredicted RBP22.58■■□□□ 1.21
HLA-C-201ENST00000376228 SIX4Q9UIU6 781 aa22.58■■□□□ 1.21
HLA-C-201ENST00000376228 KRT5P13647 590 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ZNF132P52740 706 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 BTG3Q14201 252 aaPredicted RBP22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ALKAL1Q6UXT8 129 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 FIBCD1Q8N539 461 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ITGA11Q9UKX5 1188 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 PCDHB7Q9Y5E2 793 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ZSCAN20P17040 1043 aaPredicted RBP22.57■■□□□ 1.2
HLA-C-201ENST00000376228 HADHBP55084 474 aaKnown RBP22.57■■□□□ 1.2
HLA-C-201ENST00000376228 YWHAEP62258 255 aaKnown RBP22.57■■□□□ 1.2
HLA-C-201ENST00000376228 WHAMMP3Q1A5X7 153 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ZNF699Q32M78 642 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 PALB2Q86YC2 1186 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 ELMO3Q96BJ8 720 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 SNX27Q96L92 541 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 PCDHB18PQ96TA0 734 aa22.57■■□□□ 1.2
HLA-C-201ENST00000376228 XIRP2A4UGR9 3374 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 PRRC2BQ5JSZ5 2229 aaKnown RBP22.56■■□□□ 1.2
HLA-C-201ENST00000376228 LPXNO60711 386 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 MMEP08473 750 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 YARSP54577 528 aaKnown RBP22.56■■□□□ 1.2
HLA-C-201ENST00000376228 ZBTB6Q15916 424 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 XKR4Q5GH76 650 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 UBXN11Q5T124 520 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 SCARA3Q6AZY7 606 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 FBXO22Q8NEZ5 403 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 CTNNBL1Q8WYA6 563 aaPredicted RBP22.56■■□□□ 1.2
HLA-C-201ENST00000376228 RFFLQ8WZ73 363 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 EIF2AQ9BY44 585 aaKnown RBP22.56■■□□□ 1.2
HLA-C-201ENST00000376228 BCO2Q9BYV7 579 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 PIN4Q9Y237 131 aaKnown RBP22.56■■□□□ 1.2
HLA-C-201ENST00000376228 PCDHB4Q9Y5E5 795 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 SAR1BQ9Y6B6 198 aa22.56■■□□□ 1.2
HLA-C-201ENST00000376228 ATG2AQ2TAZ0 1938 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 ATP1A1P05023 1023 aaKnown RBP22.55■■□□□ 1.2
HLA-C-201ENST00000376228 FGFR1P11362 822 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 TRIM72Q6ZMU5 477 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 UBE2Q2Q8WVN8 375 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 CHST12Q9NRB3 414 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 SNTG2Q9NY99 539 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 TAS2R14Q9NYV8 317 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 CNTN3Q9P232 1028 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 MTCH2Q9Y6C9 303 aa22.55■■□□□ 1.2
HLA-C-201ENST00000376228 BUB1O43683 1085 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 FTLP02792 175 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-201ENST00000376228 LINC00271P0C7V0 271 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 ASPAP45381 313 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 RBP5P82980 135 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 ZNF667Q5HYK9 610 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 PPP1R2P3Q6NXS1 205 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 TMEM270Q6UE05 265 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 CEP112Q8N8E3 955 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 RBBP8NLQ8NC74 664 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-201ENST00000376228 RNF169Q8NCN4 708 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms