RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 MMP13P45452 471 aa9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 PSMC1P62191 440 aaKnown RBP9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 TFAMQ00059 246 aaKnown RBP9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 DLGAP5Q15398 846 aa9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 RIT2Q99578 217 aa9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 DDX28Q9NUL7 540 aaKnown RBP9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 AGPAT5Q9NUQ2 364 aa9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 SEPT10Q9P0V9 454 aa9.21□□□□□ -0.94
SHROOM4-202ENST00000376020 RP1P56715 2156 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ERI2A8K979 691 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TRDMT1O14717 391 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ACADSBP45954 432 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CACNA2D1P54289 1103 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TP53BP2Q13625 1128 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ZNF572Q7Z3I7 529 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ERO1BQ86YB8 467 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TRPC7Q9HCX4 862 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 DKK3Q9UBP4 350 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 MYRFQ9Y2G1 1151 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ATRNO75882 1429 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 H3BQF6 201 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CYP2C9P11712 490 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 PHKA2P46019 1235 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CLK1P49759 484 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 FAM83EQ2M2I3 478 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SAMD4BQ5PRF9 694 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 C3orf62Q6ZUJ4 267 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ISCA1Q9BUE6 129 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 GOLPH3Q9H4A6 298 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CPSF3Q9UKF6 684 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 MROH7Q68CQ1 1323 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ROBO3Q96MS0 1386 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 MXD4Q14582 209 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 DCLK3Q9C098 648 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 FETUBQ9UGM5 382 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 MCM8Q9UJA3 840 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 EMSYQ7Z589 1322 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ARMCX4Q5H9R4 360 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 BNC2Q6ZN30 1099 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 NCLNQ969V3 563 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CCNL1Q9UK58 526 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 BAZ2AQ9UIF9 1905 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 PTK6Q13882 451 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TMEM237Q96Q45 408 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 EPAS1Q99814 870 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 C9orf16Q9BUW7 83 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SUPT3HO75486 399 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 GYG1P46976 350 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SLC18A1P54219 525 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ACVR2BQ13705 512 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ANO4Q32M45 955 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 STOX1Q6ZVD7 989 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 PNPT1Q8TCS8 783 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 TMEM109Q9BVC6 243 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 MRPL4Q9BYD3 311 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 WDR12Q9GZL7 423 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 POTEMA6NI47 508 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 STX7O15400 261 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 WDR47O94967 919 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ENO1P06733 434 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 KRT6CP48668 564 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SPATA18Q8TC71 538 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 DGCR14Q96DF8 476 aaKnown RBP9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 FEM1BQ9UK73 627 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 ANKRD6Q9Y2G4 727 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 CCDC88CQ9P219 2028 aa9.2□□□□□ -0.94
SHROOM4-202ENST00000376020 SASH3O75995 380 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 POLR2EP19388 210 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 KLRC1P26715 233 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 ITGA1P56199 1179 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 LRRC41Q15345 812 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 LACTB2Q53H82 288 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 NAIF1Q69YI7 327 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 SLC22A9Q8IVM8 553 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 SVOPQ8N4V2 548 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 ZNF556Q9HAH1 456 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 SSU72Q9NP77 194 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 WDR91A4D1P6 747 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 GSNP06396 782 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 OSCP1Q8WVF1 389 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 MED15Q96RN5 788 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 TLR10Q9BXR5 811 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 UBE2OQ9C0C9 1292 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 CAB39Q9Y376 341 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 UBOX5O94941 541 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 C1QBPQ07021 282 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 EPHA7Q15375 998 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 MAB21L3Q8N8X9 362 aa9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 MRPS26Q9BYN8 205 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-202ENST00000376020 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms