RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TNFSF9P41273 254 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 MAPK6Q16659 721 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 POU5F2Q8N7G0 328 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 CFAP57Q96MR6 1250 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 EXOC7Q9UPT5 735 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 STK10O94804 968 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 FGFR1P11362 822 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 RGS7P49802 495 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 RASSF2P50749 326 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 BNIP1Q12981 228 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TRPC3Q13507 836 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 PEX6Q13608 980 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 FBXO36Q8NEA4 188 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 NLRP4Q96MN2 994 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 PGLYRP2Q96PD5 576 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TMEM8AQ9HCN3 771 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■■■□□ 18.7
MCF2L-202ENST00000375597 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 LAMA3Q16787 3333 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 K7ERI5 159 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 MT-ND3P03897 115 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 GHRP10912 638 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 ABCG1P45844 678 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 HIF1AQ16665 826 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 WLSQ5T9L3 541 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 RNF220Q5VTB9 566 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 ALYREFQ86V81 257 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TRIM50Q86XT4 487 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 ACTL9Q8TC94 416 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 DENND2DQ9H6A0 471 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 TXLNGQ9NUQ3 528 aa12.43□□□□□ -0.42
MCF2L-202ENST00000375597 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
MCF2L-202ENST00000375597 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 FAM237BA0A1B0GVD1 139 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CAPN9O14815 690 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 MAP3K13O43283 966 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 ESRRAP11474 423 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CIITAP33076 1130 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 HSPA1LP34931 641 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 RAB6CQ53S08 254 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 ZC3H3Q8IXZ2 948 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 GPD1LQ8N335 351 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 TMEM161BQ8NDZ6 487 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 UBA3Q8TBC4 463 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 SYT11Q9BT88 431 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 RAB6CQ9H0N0 254 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 NUB1Q9Y5A7 615 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CYB561D2O14569 222 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 TOM1L1O75674 476 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 UNC5CO95185 931 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 TROVE2P10155 538 aaKnown RBP eCLIP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CCND1P24385 295 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CRADDP78560 199 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PRKCEQ02156 737 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 KHDC1Q4VXA5 237 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CFAP157Q5JU67 520 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CEP120Q8N960 986 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 CRYGNQ8WXF5 182 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PDGFDQ9GZP0 370 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 SLC17A6Q9P2U8 582 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 LOC100653049A0A140TA62 436 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 DPPA5A6NC42 116 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 LPXNO60711 386 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 ZMPSTE24O75844 475 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 KRT34O76011 436 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PYGBP11216 843 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 ETS2P15036 469 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PTDSS1P48651 473 aaKnown RBP12.42□□□□□ -0.42
MCF2L-202ENST00000375597 MTFR1Q15390 333 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 PTPRN2Q92932 1015 aa12.42□□□□□ -0.42
MCF2L-202ENST00000375597 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms