RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GUCY1A3Q02108 690 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 SPARCL1Q14515 664 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ARSHQ5FYA8 562 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ATP11CQ8NB49 1132 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ZNF606Q8WXB4 792 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 KLHL29Q96CT2 875 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 PABPC5Q96DU9 382 aaKnown RBP18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ZSWIM1Q9BR11 485 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ERP44Q9BS26 406 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 LMO7Q8WWI1 1683 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 MANSC4A6NHS7 340 aaPredicted RBP18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 TXNDC9O14530 226 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ACCSLQ4AC99 568 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 FAXCQ5TGI0 409 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 MAP4K3Q8IVH8 894 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 IFT43Q96FT9 208 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ANGPTL3Q9Y5C1 460 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 A0A087WUV0 522 aaPredicted RBP18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 DDX3XO00571 662 aaKnown RBP eCLIP18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 CYB561D2O14569 222 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 ATP6V1G3Q96LB4 118 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 TINF2Q9BSI4 451 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 PDGFCQ9NRA1 345 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 GPATCH2LQ9NWQ4 482 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 AIPL1Q9NZN9 384 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 HES2Q9Y543 173 aa18.87■□□□□ 0.61
PTPDC1-202ENST00000375360 NFKBIEO00221 500 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 POMCP01189 267 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 TRAIPQ9BWF2 469 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 TRPC7Q9HCX4 862 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 NEU2Q9Y3R4 380 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 LRRIQ3A6PVS8 624 aaPredicted RBP18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 AP1G2O75843 785 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 GZMAP12544 262 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 GLRA2P23416 452 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 PPP2R2AP63151 447 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 MMEL1Q495T6 779 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 ANO5Q75V66 913 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 WDR49Q8IV35 697 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 BHMTQ93088 406 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 TTC25Q96NG3 672 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 KCPQ6ZWJ8 1503 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 CLGNO14967 610 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 ZFXP17010 805 aaPredicted RBP18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 ACAT1P24752 427 aaKnown RBP18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 PTPN11Q06124 597 aaPredicted RBP18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 POU5F1BQ06416 359 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 PIDD1Q9HB75 910 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 DDIT4Q9NX09 232 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 HSDL1Q3SXM5 330 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 BEND6Q5SZJ8 279 aaPredicted RBP18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 FAM71DQ8N9W8 422 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 DCTN4Q9UJW0 460 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 SLIT2O94813 1529 aa18.86■□□□□ 0.61
PTPDC1-202ENST00000375360 PGK1P00558 417 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 PORCNQ9H237 461 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 GPR182O15218 404 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 ZC3H11AO75152 810 aaKnown RBP eCLIP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 MAPTP10636 758 aaKnown RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 RECQLP46063 649 aaPredicted RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 NAA25Q14CX7 972 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 LRRN4CLQ8ND94 238 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 TMEM106CQ9BVX2 250 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 SIK3Q9Y2K2 1263 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 PHLPP1O60346 1717 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 GOLGA8CPA6NN73 597 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 M0QYT0 321 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 PPP1R12AO14974 1030 aaPredicted RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 GJB6O95452 261 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 THP07101 528 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 NCF2P19878 526 aaPredicted RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 PTGER2P43116 358 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 NPY5RQ15761 445 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 CELF3Q5SZQ8 465 aaKnown RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 RNF135Q8IUD6 432 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 TRIM42Q8IWZ5 723 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 UBE2Q2Q8WVN8 375 aa18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 SARS2Q9NP81 518 aaKnown RBP18.85■□□□□ 0.61
PTPDC1-202ENST00000375360 PNPLA4P41247 253 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 RAPGEF5Q92565 580 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 TSR3Q9UJK0 312 aaKnown RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 CHMP2BQ9UQN3 213 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 RRP15Q9Y3B9 282 aaKnown RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 PRRG1O14668 218 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 KITP10721 976 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 SERPINB6P35237 376 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 HNRNPH2P55795 449 aaKnown RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 KLHL38Q2WGJ6 581 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 FAM131BQ86XD5 332 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 STARD7Q9NQZ5 370 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 ASTN1O14525 1302 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 ROBO3Q96MS0 1386 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 LACTBL1A8MY62 500 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms