RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DDX3XO00571 662 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 AIM2O14862 343 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 MUTP22033 750 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 RBP5P82980 135 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 CUL2Q13617 745 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 DACT3Q96B18 629 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 DCLRE1BQ9H816 532 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SYCE1LA8MT33 242 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SNX2O60749 519 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 RANBP1P43487 201 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 NFIAQ12857 509 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 EME1Q96AY2 570 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 IL10P22301 178 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 SPRP35270 261 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 RPS6P62753 249 aaKnown RBP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 SCN4BQ8IWT1 228 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 TAS1R2Q8TE23 839 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 RIPK2O43353 540 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 INPP1P49441 399 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 RXFP1Q9HBX9 757 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 PNMA3Q9UL41 463 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 CYTH3O43739 400 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 MYBL2P10244 700 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 ARHGDIAP52565 204 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 CCNG2Q16589 344 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 UGP2Q16851 508 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 EIF1ADQ8N9N8 165 aaKnown RBP12.07□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF560Q96MR9 790 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM51Q9NW97 253 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
PTCH1-203ENST00000375274 TRAPPC3O43617 180 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 ARP10275 920 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 XPAP23025 273 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 MYBPC2Q14324 1141 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 KYAT1Q16773 422 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 SLC47A2Q86VL8 602 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 SUGP1Q8IWZ8 645 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 IFT43Q96FT9 208 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 PGM2Q96G03 612 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 EPAS1Q99814 870 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 PROSCO94903 275 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 ATP6V1G2O95670 118 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TPI1P60174 286 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 IFI35P80217 286 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 USP10Q14694 798 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TTMPQ5BVD1 217 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TEKT4Q8WW24 435 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 GEMIN8Q9NWZ8 242 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 CDY1Q9Y6F8 540 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 KIF20BQ96Q89 1820 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF189O75820 626 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 HSD17B4P51659 736 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 BOLA3Q53S33 107 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TFDP3Q5H9I0 405 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 KCNK18Q7Z418 384 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 FBXO36Q8NEA4 188 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 SLC5A5Q92911 643 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 NAF1Q96HR8 494 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 NT5C1AQ9BXI3 368 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 MRPL1Q9BYD6 325 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 ZC3H11AO75152 810 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 FSBPO95073 299 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 HNRNPCP07910 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 GPD1P21695 349 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 RPL21P46778 160 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM119Q4V9L6 283 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 FRA10AC1Q70Z53 315 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 SV2AQ7L0J3 742 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 DDIASQ8IXT1 998 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 FUKQ8N0W3 1084 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 PRPF31Q8WWY3 499 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 PBXIP1Q96AQ6 731 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 THAP11Q96EK4 314 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 TASP1Q9H6P5 420 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 METTL5Q9NRN9 209 aaKnown RBP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCH1-203ENST00000375274 STX18Q9P2W9 335 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms