RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RXFP1Q9HBX9 757 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PRMT7Q9NVM4 692 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MIOSQ9NXC5 875 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PATJQ8NI35 1801 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 A0A0B4J269 797 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CLDN3O15551 220 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 EXTL3O43909 919 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 STX10O60499 249 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TOM1L1O75674 476 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 LMNAP02545 664 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 VAMP7P51809 220 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DSG1Q02413 1049 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 BFSP1Q12934 665 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SYCP1Q15431 976 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SNRNP35Q16560 246 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DCAF17Q5H9S7 520 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ATF7IP2Q5U623 682 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TCERG1LQ5VWI1 586 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CCDC150Q8NCX0 1101 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SLC35C1Q96A29 364 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 IQCDQ96DY2 449 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SAAL1Q96ER3 474 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TCHPQ9BT92 498 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MSTO1Q9BUK6 570 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ARHGEF3Q9NR81 526 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CACNG4Q9UBN1 327 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 AGO2Q9UKV8 859 aaKnown RBP11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 USP20Q9Y2K6 914 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CACNA1IQ9P0X4 2223 aa11.79□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 AKR1B15C9JRZ8 316 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 B4GALT5O43286 388 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TGM5O43548 720 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 EDN1P05305 212 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ENPEPQ07075 957 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NCBP1Q09161 790 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HTR4Q13639 388 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FUT10Q6P4F1 479 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NOTUMQ6P988 496 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 USP37Q86T82 979 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CBWD2Q8IUF1 395 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 LRRC8AQ8IWT6 810 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KIAA2013Q8IYS2 634 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZSWIM2Q8NEG5 633 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CPLX3Q8WVH0 158 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CCDC51Q96ER9 411 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZNF830Q96NB3 372 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HINFPQ9BQA5 517 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GPR62Q9BZJ7 368 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FOXQ1Q9C009 403 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MMRN2Q9H8L6 949 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 UBN1Q9NPG3 1134 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TNFSF13BQ9Y275 285 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DNAH14Q0VDD8 3507 aa11.78□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ANHXE9PGG2 379 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LRRN2O75325 713 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LAMP2P13473 410 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ARF4P18085 180 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 AKAP5P24588 427 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CASP14P31944 242 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MCL1Q07820 350 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CYP24A1Q07973 514 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KCNMA1Q12791 1236 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 AMHR2Q16671 573 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FIGNQ5HY92 759 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MPZL3Q6UWV2 235 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GBP6Q6ZN66 633 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HASPINQ8TF76 798 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CACTINQ8WUQ7 758 aaKnown RBP11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 COLEC11Q9BWP8 271 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HAPLN2Q9GZV7 340 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PTPRHQ9HD43 1115 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms