RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NR2E1Q9Y466 385 aa19.12■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PHF2O75151 1096 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CRYBB1P53674 252 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TAP1Q03518 808 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ZBTB6Q15916 424 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 C2CD6Q53TS8 623 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SLC13A5Q86YT5 568 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 WDTC1Q8N5D0 677 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SLC4A11Q8NBS3 891 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 FEZF2Q8TBJ5 459 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TSPAN18Q96SJ8 248 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 HINFPQ9BQA5 517 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 EIF2AQ9BY44 585 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ERVK-5Q9HDB9 667 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SNTG2Q9NY99 539 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CNTN3Q9P232 1028 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ABT1Q9ULW3 272 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PSTPIP1O43586 416 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ALDH1A1P00352 501 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 OAS2P29728 719 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 YARSP54577 528 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CDH8P55286 799 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PTPN11Q06124 597 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 GABPB1Q06547 395 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 DHX34Q14147 1143 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CYP1B1Q16678 543 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MFSD14CQ5VZR4 134 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 AADACL2Q6P093 401 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TAF2Q6P1X5 1199 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ALKAL1Q6UXT8 129 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SND1Q7KZF4 910 aaKnown RBP eCLIP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 C7orf31Q8N865 590 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PPP1R13LQ8WUF5 828 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 IP6K2Q9UHH9 426 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 AMACRQ9UHK6 382 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 STRIP2Q9ULQ0 834 aa19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.11■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ESYT3A0FGR9 886 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 FAM187AA6NFU0 413 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CHRNA3P32297 505 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PSMC4P43686 418 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 GUCY2FP51841 1108 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 GSCP56915 257 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ZNF200P98182 395 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TMEM130Q8N3G9 435 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MREGQ8N565 214 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 C12orf50Q8NA57 414 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TMEM40Q8WWA1 233 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TRIB2Q92519 343 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TMEM176AQ96HP8 235 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ZIC5Q96T25 663 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MTG1Q9BT17 334 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ELOVL4Q9GZR5 314 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MED4Q9NPJ6 270 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 BARX2Q9UMQ3 279 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 NFU1Q9UMS0 254 aa19.1■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TMEM191CA6NGB0 347 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 H3BQF6 201 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 CD19P15391 556 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MYO1EQ12965 1108 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PPP1R15BQ5SWA1 713 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 DENND1BQ6P3S1 775 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PHLDB2Q86SQ0 1253 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ERICH1Q86X53 443 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 LRRC52Q8N7C0 313 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PRELID2Q8N945 189 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 C3orf20Q8ND61 904 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 RUNDC3BQ96NL0 473 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TWNKQ96RR1 684 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PCYOX1Q9UHG3 505 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MTUS1Q9ULD2 1270 aa19.09■□□□□ 0.65
HLA-DQB1-201ENST00000374943 MYADML2A6NDP7 307 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 FSCN2O14926 492 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 TTI1O43156 1089 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 C6orf222P0C671 652 aaPredicted RBP19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 VDRP11473 427 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ECHS1P30084 290 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 SIX1Q15475 284 aaPredicted RBP19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 XKR4Q5GH76 650 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 DNAJC24Q6P3W2 148 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 RHOT1Q8IXI2 618 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 BEST2Q8NFU1 509 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 IFT81Q8WYA0 676 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ZMAT2Q96NC0 199 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 RAB17Q9H0T7 212 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 ST7Q9NRC1 585 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 KIAA1257Q9ULG3 409 aa19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 PIN4Q9Y237 131 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-201ENST00000374943 RECQL4O94761 1208 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 DR1Q01658 176 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 UBXN11Q5T124 520 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 KATNAL2Q8IYT4 538 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 ZDHHC14Q8IZN3 488 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 MAIP1Q8WWC4 291 aa19.08■□□□□ 0.64
HLA-DQB1-201ENST00000374943 GDAP1L1Q96MZ0 367 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms