RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FASTKD3Q14CZ7 662 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 CCDC6Q16204 474 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DDX1Q92499 740 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 UBN1Q9NPG3 1134 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DCTN4Q9UJW0 460 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ZNF536O15090 1300 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 SMIM24O75264 130 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ATP6V1C1P21283 382 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DSG3P32926 999 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 SLC1A5Q15758 541 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 PDK4Q16654 411 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 NEU2Q9Y3R4 380 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
CCDC40-203ENST00000374877 MUTP22033 750 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 NR1H3Q13133 447 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 BIRC2Q13490 618 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 CCNG2Q16589 344 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 NLRP9Q7RTR0 991 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
CCDC40-203ENST00000374877 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.53
CCDC40-203ENST00000374877 FBXL13Q8NEE6 735 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 ASAP3Q8TDY4 903 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 C10orf82Q8WW14 230 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 SH3GL3Q99963 347 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
CCDC40-203ENST00000374877 E7ENQ6 273 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 MAGEB2O15479 319 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 GCAP28676 217 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 SLC1A1P43005 524 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 TUBP50607 506 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 TAS2R40P59535 323 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 ALCAMQ13740 583 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 SEPT7Q16181 437 aaKnown RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 APBB1IPQ7Z5R6 666 aaPredicted RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.54
CCDC40-203ENST00000374877 GLIS1Q8NBF1 620 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 DENND1AQ8TEH3 1009 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 TSC22D3Q99576 134 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 KIFC3Q9BVG8 833 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 ELP3Q9H9T3 547 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 RRAGCQ9HB90 399 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 CCPG1Q9ULG6 757 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 ZNF148Q9UQR1 794 aa11.71□□□□□ -0.54
CCDC40-203ENST00000374877 A0A1W2PPM1 405 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 VWA5AO00534 786 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 ATP2A1O14983 1001 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 NEFHP12036 1026 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 MRPS35P82673 323 aaKnown RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 KLF1Q13351 362 aaPredicted RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 AP1ARQ63HQ0 302 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 TMEM154Q6P9G4 183 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 LVRNQ6Q4G3 990 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 OTOAQ7RTW8 1153 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 MCF2L2Q86YR7 1114 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 C12orf56Q8IXR9 622 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 EHMT1Q9H9B1 1298 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 SMG5Q9UPR3 1016 aaKnown RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PRPF4O43172 522 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 ABHD2P08910 425 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 ETS1P14921 441 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PECAM1P16284 738 aaPredicted RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 MARK3P27448 753 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 RARRES1P49788 294 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 KLC1Q07866 573 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 OVGP1Q12889 678 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 DGKZQ13574 1117 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 WASHC2DQ5SRD0 308 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 ZBED8Q8IZ13 594 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 REPS2Q8NFH8 660 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 HOXC10Q9NYD6 342 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PIAS1O75925 651 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 KRT10P13645 584 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PTPN4P29074 926 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 TKFCQ3LXA3 575 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 RFWD3Q6PCD5 774 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 RHOT1Q8IXI2 618 aa11.7□□□□□ -0.54
CCDC40-203ENST00000374877 PROSCO94903 275 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GPC3P51654 580 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ARSEP51690 589 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GPS1Q13098 491 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms