RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 AKR1B10O60218 316 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 ODC1P11926 461 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 CHRNB2P17787 502 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 GNA15P30679 374 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC4A11Q8NBS3 891 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 ACP6Q9NPH0 428 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 MARCH5Q9NX47 278 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 REXO2Q9Y3B8 237 aaKnown RBP18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 NME7Q9Y5B8 376 aa18.37■□□□□ 0.53
HLA-DMA-201ENST00000374843 A0A087X0T9 212 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZNF263O14978 683 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 UPP2O95045 317 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 ITGB1P05556 798 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 FAM228BP0C875 321 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 SYN1P17600 705 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 TYMPP19971 482 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC11A1P49279 550 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 NDST1P52848 882 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 HTRA4P83105 476 aaPredicted RBP18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 FMO1Q01740 532 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 RASIP1Q5U651 963 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 DESI2Q9BSY9 194 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 NT5C1AQ9BXI3 368 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 CWH43Q9H720 699 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 DSEQ9UL01 958 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 PCDHB8Q9UN66 801 aa18.36■□□□□ 0.53
HLA-DMA-201ENST00000374843 CARNS1A5YM72 827 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 IPO7O95373 1038 aaKnown RBP18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 GALTP07902 379 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 CCDC175P0C221 793 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 OR1G1P47890 313 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 WSCD1Q658N2 575 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 DSTYKQ6XUX3 929 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 TRIM72Q6ZMU5 477 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 OSTM1Q86WC4 334 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 ACRBPQ8NEB7 543 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 PHOSPHO2Q8TCD6 241 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 RABGGTAQ92696 567 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 SLC9A7Q96T83 725 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 LBHD1Q9BQE6 289 aaPredicted RBP18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZSWIM1Q9BR11 485 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 ADAMTS1Q9UHI8 967 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 NAGPAQ9UK23 515 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 STXBP5LQ9Y2K9 1186 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 PPP2R2CQ9Y2T4 447 aa18.35■□□□□ 0.53
HLA-DMA-201ENST00000374843 F8W810 466 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 NRP1O14786 923 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 CCP110O43303 1012 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 GJB5O95377 273 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 EFEMP2O95967 443 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 MMEP08473 750 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 BRCC3P46736 316 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 KRT83P78385 493 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 SPA17Q15506 151 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 PAN2Q504Q3 1202 aaKnown RBP18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 C10orf76Q5T2E6 689 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZNF662Q6ZS27 426 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 CCAR2Q8N163 923 aaKnown RBP18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 CRYBG2Q8N1P7 616 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 COLEC11Q9BWP8 271 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 DNAI2Q9GZS0 605 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 MTIF3Q9H2K0 278 aaKnown RBP18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 SNX25Q9H3E2 840 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 CXXC1Q9P0U4 656 aaPredicted RBP18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
HLA-DMA-201ENST00000374843 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.53
HLA-DMA-201ENST00000374843 ZBBXA8MT70 800 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 SYN3O14994 580 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 THAP12O43422 761 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 TRAPPC3O43617 180 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 LSM8O95777 96 aaKnown RBP18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 VDRP11473 427 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 GZMAP12544 262 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 TNFAIP3P21580 790 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 BRD2P25440 801 aaKnown RBP18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 GNL1P36915 607 aaPredicted RBP18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 LHX1P48742 406 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 BCAR1P56945 870 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZNF394Q53GI3 561 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 TAF3Q5VWG9 929 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 PALB2Q86YC2 1186 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 TNS4Q8IZW8 715 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 OR6B3Q8NGW1 331 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 HASPINQ8TF76 798 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZNF606Q8WXB4 792 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 TFAP2BQ92481 460 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms