RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 ABCB6Q9NP58 842 aa16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 CDC23Q9UJX2 597 aa16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 GTF3C4Q9UKN8 822 aa16.72■□□□□ 0.27
NIPAL3-204ENST00000374399 KPNA7A9QM74 516 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 INPPL1O15357 1258 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 HCRTO43612 131 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 MTA2O94776 668 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 THP07101 528 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 FGFR1P11362 822 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 NOP2P46087 812 aaKnown RBP16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 LBX1P52954 281 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 FAAP100Q0VG06 881 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 BFSP2Q13515 415 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 PLEKHG4Q58EX7 1191 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 MEI1Q5TIA1 1274 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 LLGL2Q6P1M3 1020 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 PHF13Q86YI8 300 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 C3orf58Q8NDZ4 430 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 PAAF1Q9BRP4 392 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
NIPAL3-204ENST00000374399 BUB1BO60566 1050 aaPredicted RBP16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 SRGAP2O75044 1071 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 FTCDO95954 541 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 TAF6P49848 677 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 CLCNKBP51801 687 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 DENND1BQ6P3S1 775 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 CD300LGQ6UXG3 332 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 CYTH4Q9UIA0 394 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 L1RE1Q9UN81 338 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 CTIFO43310 598 aaKnown RBP16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 PNPLA4P41247 253 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 TRIM60Q495X7 471 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 C1orf53Q5VUE5 145 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 SLC24A5Q71RS6 500 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 ZNF653Q96CK0 615 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 SNX12Q9UMY4 172 aa16.7■□□□□ 0.26
NIPAL3-204ENST00000374399 KIAA0100Q14667 2235 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 O00370 1275 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 B4GALT3O60512 393 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 POMCP01189 267 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 SKIP12755 728 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 CD19P15391 556 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 MMP8P22894 467 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 RRM1P23921 792 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 NSFP46459 744 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 GJA8P48165 433 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 TLE2Q04725 743 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 CLLU1OSQ5K130 101 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 RHOT2Q8IXI1 618 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 PGBD4Q96DM1 585 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 VWCEQ96DN2 955 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 CARD6Q9BX69 1037 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 DPEP3Q9H4B8 488 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 AVENQ9NQS1 362 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
NIPAL3-204ENST00000374399 TCRBV5S1A1TA0A578 114 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 PODXLO00592 558 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 ZNF185O15231 689 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 SLU7O95391 586 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 LSM8O95777 96 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 PRLRP16471 622 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 IBSPP21815 317 aaPredicted RBP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 LMO2P25791 158 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 IFI16Q16666 785 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 UPP1Q16831 310 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 SV2CQ496J9 727 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 NT5DC3Q86UY8 548 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 C12orf29Q8N999 325 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 COG1Q8WTW3 980 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 TOX2Q96NM4 488 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 LPIN3Q9BQK8 851 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 C11orf70Q9BRQ4 267 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 NUP85Q9BW27 656 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 NT5C1AQ9BXI3 368 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 CTTNBP2NLQ9P2B4 639 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 CNOT8Q9UFF9 292 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 TSC2P49815 1807 aa16.68■□□□□ 0.26
NIPAL3-204ENST00000374399 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
NIPAL3-204ENST00000374399 CASTOR2A6NHX0 329 aa16.67■□□□□ 0.26
NIPAL3-204ENST00000374399 ENPP3O14638 875 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms