RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 VGLL4Q14135 290 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 LY6KQ17RY6 165 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 ANKRD20A8PQ5CZ79 823 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 NOL9Q5SY16 702 aaKnown RBP5.68□□□□□ -1.5
SRRM1-202ENST00000374389 C6orf118Q5T5N4 469 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 MFSD7Q6UXD7 560 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 TRMT10CQ7L0Y3 403 aaKnown RBP5.68□□□□□ -1.5
SRRM1-202ENST00000374389 CDR2LQ86X02 465 aaPredicted RBP5.68□□□□□ -1.5
SRRM1-202ENST00000374389 KATNAL2Q8IYT4 538 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 LRRC71Q8N4P6 559 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 WDTC1Q8N5D0 677 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 C3orf20Q8ND61 904 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 PRPF31Q8WWY3 499 aaKnown RBP5.68□□□□□ -1.5
SRRM1-202ENST00000374389 ZNF606Q8WXB4 792 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 TFAP2BQ92481 460 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 TRIM11Q96F44 468 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 SNF8Q96H20 258 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 FGD4Q96M96 766 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 CCDC113Q9H0I3 377 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 MLXIPLQ9NP71 852 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 HOXC10Q9NYD6 342 aa5.68□□□□□ -1.5
SRRM1-202ENST00000374389 PSTPIP1O43586 416 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 USP2O75604 605 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TTC4O95801 387 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ETS1P14921 441 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ATF2P15336 505 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ITIH2P19823 946 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 KLRC2P26717 231 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TCF7P36402 384 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SSR1P43307 286 aaKnown RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SH3D19Q5HYK7 790 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SLFN12LQ6IEE8 588 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SCARA5Q6ZMJ2 495 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 MICALCLQ6ZW33 695 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 APOBEC3FQ8IUX4 373 aaKnown RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 RHOT1Q8IXI2 618 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CACNA2D3Q8IZS8 1091 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 FEZF2Q8TBJ5 459 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 MGARPQ8TDB4 240 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 KHSRPQ92945 711 aaKnown RBP eCLIP5.67□□□□□ -1.57e-7■■□□□ 14.3
SRRM1-202ENST00000374389 CCDC97Q96F63 343 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 FAM81BQ96LP2 452 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 C9orf72Q96LT7 481 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 INTS9Q9NV88 658 aaKnown RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 IVNS1ABPQ9Y6Y0 642 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 BRCA1P38398 1863 aaKnown RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TMEM191CA6NGB0 347 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 B4GALT5O43286 388 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ATP2C2O75185 946 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 GH1P01241 217 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 HOXC6P09630 235 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 WEE2P0C1S8 567 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TMEM191BP0C7N4 346 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ADCY8P40145 1251 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 STAT5BP51692 787 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CCNG2Q16589 344 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 HSDL1Q3SXM5 330 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 LIN9Q5TKA1 542 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 GKAP1Q5VSY0 366 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 IZUMO3Q5VZ72 239 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 KAZNQ674X7 775 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TRIM72Q6ZMU5 477 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 PIGWQ7Z7B1 504 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CPLX4Q7Z7G2 160 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CHST13Q8NET6 341 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 EXD1Q8NHP7 514 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TRAPPC12Q8WVT3 735 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CCT6BQ92526 530 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ARHGEF2Q92974 986 aaKnown RBP5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CABS1Q96KC9 395 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 MCEEQ96PE7 176 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 PLVAPQ9BX97 442 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CCDC134Q9H6E4 229 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TMEM134Q9H6X4 195 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 GPRC5DQ9NZD1 345 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 ANAPC5Q9UJX4 755 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 DNPEPQ9ULA0 475 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 CD2APQ9Y5K6 639 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 SIP14410 1827 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 LTBP3Q9NS15 1303 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 LOC285556D6RIA3 1793 aa5.67□□□□□ -1.5
SRRM1-202ENST00000374389 TMEM120BA0PK00 339 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 CREB3O43889 395 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 MAFO75444 373 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-202ENST00000374389 CNMDO75829 334 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 GAS8O95995 478 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 PGK2P07205 417 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 TBXAS1P24557 533 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-202ENST00000374389 RFC5P40937 340 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 ASPAP45381 313 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 NFX1Q12986 1120 aaKnown RBP5.66□□□□□ -1.5
SRRM1-202ENST00000374389 FASTKD3Q14CZ7 662 aaKnown RBP5.66□□□□□ -1.5
SRRM1-202ENST00000374389 PPP1R15BQ5SWA1 713 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 CYP4A22Q5TCH4 519 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 EEF1DP3Q658K8 133 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 CCDC121Q6ZUS5 278 aa5.66□□□□□ -1.5
SRRM1-202ENST00000374389 TMEM192Q8IY95 271 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms