RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 RASA2Q15283 850 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ARSHQ5FYA8 562 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 CCDC80Q76M96 950 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SLC15A3Q8IY34 581 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 MTBPQ96DY7 904 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 THTPAQ9BU02 230 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 S100A14Q9HCY8 104 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 A0A1B0GUL6 1792 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 C15orf38-AP3S2A0A0A6YYH1 394 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 PLS3P13797 630 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 KRT4P19013 534 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 CHRNA5P30532 468 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 HOXD12P35452 270 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 PSMD7P51665 324 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SEPT7Q16181 437 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 NADK2Q4G0N4 442 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ARPINQ7Z6K5 226 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 GJA10Q969M2 543 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 RANBP17Q9H2T7 1088 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 SSU72Q9NP77 194 aaKnown RBP13.6□□□□□ -0.23
PRPF4-201ENST00000374198 DMTF1Q9Y222 760 aa13.6□□□□□ -0.23
PRPF4-201ENST00000374198 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 TMEM247A6NEH6 219 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 TGDSO95455 350 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 MTTPP55157 894 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ARL4CP56559 192 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 IZUMO3Q5VZ72 239 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 USP17L1Q7RTZ2 530 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 SLC25A41Q8N5S1 370 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 HAS1Q92839 578 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 BTBD6Q96KE9 485 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 PLVAPQ9BX97 442 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 NMUR2Q9GZQ4 415 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ZNF148Q9UQR1 794 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 NEU2Q9Y3R4 380 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ASTN1O14525 1302 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 E9PBE3 544 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
PRPF4-201ENST00000374198 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 PDE5AO76074 875 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ADRM1Q16186 407 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ZCCHC9Q8N567 271 aaKnown RBP13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ABHD8Q96I13 439 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 ADAM33Q9BZ11 813 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 VPS11Q9H270 941 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 SAYSD1Q9NPB0 183 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 SUN2Q9UH99 717 aa13.59□□□□□ -0.23
PRPF4-201ENST00000374198 FOXN3O00409 490 aaPredicted RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 TXNDC9O14530 226 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 CLIC2O15247 247 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ENO1P06733 434 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 CPA3P15088 417 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 PCSK6P29122 969 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 GRAMD4Q6IC98 578 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 FBXL19Q6PCT2 694 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 TREML1Q86YW5 311 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 APEX2Q9UBZ4 518 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ITGB1BP2Q9UKP3 347 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 PCDHA12Q9UN75 941 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 R3HDM2Q9Y2K5 976 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 KANSL1LA0AUZ9 987 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 CAPN14A8MX76 684 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 LRRN2O75325 713 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 MYL2P10916 166 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 FMO5P49326 533 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 DNAL1Q4LDG9 190 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms