RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 PAX3P23760 479 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 LRPAP1P30533 357 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 NPTX2P47972 431 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 TUFMP49411 452 aaKnown RBP16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 TNK2Q07912 1038 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 OVOS1Q6IE37 1185 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 CCDC26Q8TAB7 109 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 ACDQ96AP0 544 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 RAB34Q9BZG1 259 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 PLEKHA5Q9HAU0 1116 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 UBQLN1Q9UMX0 589 aaKnown RBP16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 ASPMQ8IZT6 3477 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 TCHHQ07283 1943 aa16.13■□□□□ 0.17
CDKN1A-202ENST00000373711 KIAA1549LQ6ZVL6 1849 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 ANK1P16157 1881 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 MTMR11A4FU01 709 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 C4orf47A7E2U8 309 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 WNT7AO00755 349 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 RNF40O75150 1001 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 TOM1L1O75674 476 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 PRAMEF12O95522 483 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 APBB3O95704 486 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 OR4Q2P0C623 313 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 TYMPP19971 482 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 CYP3A5P20815 502 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 CSRP1P21291 193 aaKnown RBP16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 AVPR1AP37288 418 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 AARSP49588 968 aaKnown RBP eCLIP16.12■□□□□ 0.173e-8■■■■■ 82.4
CDKN1A-202ENST00000373711 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 BFSP1Q12934 665 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 RUNX3Q13761 415 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 CC2D1AQ6P1N0 951 aaPredicted RBP16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 GPIHBP1Q8IV16 184 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 LRRC3BQ96PB8 259 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 DUSP15Q9H1R2 295 aaPredicted RBP16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 TSC2P49815 1807 aa16.12■□□□□ 0.17
CDKN1A-202ENST00000373711 FASNP49327 2511 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 ZFYVE26Q68DK2 2539 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 BCLAF3A2AJT9 711 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 KHNYNO15037 678 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 VNN2O95498 520 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 ODC1P11926 461 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 DDX6P26196 483 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 GBP1P32455 592 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 KYAT1Q16773 422 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 SLC10A6Q3KNW5 377 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 FSTL4Q6MZW2 842 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 PKN3Q6P5Z2 889 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 KIF12Q96FN5 646 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 HHIPQ96QV1 700 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 TSPAN18Q96SJ8 248 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 TIPINQ9BVW5 301 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 CRISPLD1Q9H336 500 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 POLD4Q9HCU8 107 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 GKN1Q9NS71 199 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 EBF1Q9UH73 591 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 KIAA1024Q9UPX6 916 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 SLC27A5Q9Y2P5 690 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 TIMM13Q9Y5L4 95 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 OBSL1O75147 1896 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 ZZEF1O43149 2961 aa16.11■□□□□ 0.17
CDKN1A-202ENST00000373711 ABLIM1O14639 778 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 CLDN3O15551 220 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 SMTNP53814 917 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 CYP4F8P98187 520 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 MGAT5BQ3V5L5 792 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 ZPBP2Q6X784 338 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 SYT13Q7L8C5 426 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 CMTM8Q8IZV2 173 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 ATAD1Q8NBU5 361 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 C2orf15Q8WU43 125 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 FAM83CQ9BQN1 747 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 DNM3Q9UQ16 869 aa16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 ANKRD11Q6UB99 2663 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-202ENST00000373711 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 SOBPA7XYQ1 873 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 HIP1RO75146 1068 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 CLTAP09496 248 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 CXCL8P10145 99 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 HOXC13P31276 330 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 SMARCB1Q12824 385 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
CDKN1A-202ENST00000373711 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms