RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 HSP90AA4PQ58FG1 418 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 IRF2BP1Q8IU81 584 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 SLC22A17Q8WUG5 538 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 HLA-CQ95604 372 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 BPIFA3Q9BQP9 254 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 SAMSN1Q9NSI8 373 aaKnown RBP19.64■□□□□ 0.73
PBX3-202ENST00000373482 COQ4Q9Y3A0 265 aa19.64■□□□□ 0.73
PBX3-202ENST00000373482 DOCK6Q96HP0 2047 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 SMTNL1A8MU46 457 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 PMM2O15305 246 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 TGM5O43548 720 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 TBC1D4O60343 1298 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 GLP2RO95838 553 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 EPCAMP16422 314 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 EEF1GP26641 437 aaKnown RBP19.63■□□□□ 0.73
PBX3-202ENST00000373482 ROR1Q01973 937 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 KCNC3Q14003 757 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 MAN2A1Q16706 1144 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 RSPO2Q6UXX9 243 aaPredicted RBP19.63■□□□□ 0.73
PBX3-202ENST00000373482 TMEM184AQ6ZMB5 413 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 AOPEPQ8N6M6 819 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 PI4K2AQ9BTU6 479 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 SNX25Q9H3E2 840 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 UBE2ZQ9H832 354 aaPredicted RBP19.63■□□□□ 0.73
PBX3-202ENST00000373482 DZANK1Q9NVP4 752 aa19.63■□□□□ 0.73
PBX3-202ENST00000373482 DDX43Q9NXZ2 648 aaKnown RBP19.63■□□□□ 0.73
PBX3-202ENST00000373482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.62■□□□□ 0.73
PBX3-202ENST00000373482 ADAM12O43184 909 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 TACC1O75410 805 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 CAVIN2O95810 425 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 TPM2P07951 284 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
PBX3-202ENST00000373482 PCSK1P29120 753 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 ZNF165P49910 485 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 TCP11X2Q5H9J9 407 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 SPOPLQ6IQ16 392 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 LIMS2Q7Z4I7 341 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 ANKRD20A12PQ8NF67 263 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 VN1R2Q8NFZ6 395 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 ZNF461Q8TAF7 563 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 HDAC7Q8WUI4 952 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 SEMA4DQ92854 862 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 PLEKHA4Q9H4M7 779 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 MAN1C1Q9NR34 630 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 FANCLQ9NW38 375 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 POLIQ9UNA4 740 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 GREB1Q4ZG55 1949 aa19.62■□□□□ 0.73
PBX3-202ENST00000373482 ZNF638Q14966 1978 aaKnown RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 TCF20Q9UGU0 1960 aaKnown RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 WDR27A2RRH5 827 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 GABRDO14764 452 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 TBX10O75333 385 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 WARSP23381 471 aaKnown RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 ELF1P32519 619 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 RBM10P98175 930 aaKnown RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 TSPY1Q01534 308 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 TPGS2Q68CL5 300 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 LILRA6Q6PI73 481 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 SCARA5Q6ZMJ2 495 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 DCP1BQ8IZD4 617 aaKnown RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 KREMEN2Q8NCW0 462 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 OR6B3Q8NGW1 331 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 FAXDC2Q96IV6 333 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 ACBD6Q9BR61 282 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 NIF3L1Q9GZT8 377 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.61■□□□□ 0.731e-18■■■■■ 447.2
PBX3-202ENST00000373482 FBXW11Q9UKB1 542 aa19.61■□□□□ 0.73
PBX3-202ENST00000373482 BARX2Q9UMQ3 279 aaPredicted RBP19.61■□□□□ 0.73
PBX3-202ENST00000373482 COL6A3P12111 3177 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 BECN2A8MW95 431 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 ABLIM3O94929 683 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 SPATA31D3P0C874 917 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 HOXB8P17481 243 aaPredicted RBP19.6■□□□□ 0.73
PBX3-202ENST00000373482 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
PBX3-202ENST00000373482 KCNA5P22460 613 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
PBX3-202ENST00000373482 SMARCB1Q12824 385 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 LIN9Q5TKA1 542 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 CDKAL1Q5VV42 579 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 ANKRD54Q6NXT1 300 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 SPATA31D4Q6ZUB0 917 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 OR10T2Q8NGX3 314 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 THEGQ9P2T0 379 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 MAFFQ9ULX9 164 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 DENND4CQ5VZ89 1909 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 DENND4AQ7Z401 1863 aa19.6■□□□□ 0.73
PBX3-202ENST00000373482 PES1O00541 588 aaKnown RBP19.59■□□□□ 0.73
PBX3-202ENST00000373482 OR4Q2P0C623 313 aa19.59■□□□□ 0.73
PBX3-202ENST00000373482 ATF2P15336 505 aa19.59■□□□□ 0.73
PBX3-202ENST00000373482 TRIM21P19474 475 aaKnown RBP19.59■□□□□ 0.73
PBX3-202ENST00000373482 LTBRP36941 435 aa19.59■□□□□ 0.73
PBX3-202ENST00000373482 DLX2Q07687 328 aaPredicted RBP19.59■□□□□ 0.73
PBX3-202ENST00000373482 GPR17Q13304 367 aa19.59■□□□□ 0.73
PBX3-202ENST00000373482 VWA3BQ502W6 1294 aa19.59■□□□□ 0.73
PBX3-202ENST00000373482 SLC39A12Q504Y0 691 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms