RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 GBP7Q8N8V2 638 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RBBP8NLQ8NC74 664 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DENND1AQ8TEH3 1009 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 FAM161BQ96MY7 647 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 LZTS2Q9BRK4 669 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM121Q9BTD3 319 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM109Q9BVC6 243 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DCLK3Q9C098 648 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC27Q9C0I9 530 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ANKRD2Q9GZV1 360 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SUDS3Q9H7L9 328 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TAS2R1Q9NYW7 299 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GTF3C4Q9UKN8 822 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 VAV3Q9UKW4 847 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DNPEPQ9ULA0 475 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MTUS1Q9ULD2 1270 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 PPM1HQ9ULR3 514 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SCAF8Q9UPN6 1271 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DNAH12Q6ZR08 3092 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 KDM3AQ9Y4C1 1321 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 H3BRJ5 948 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 K7ENM7 598 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 GSC2O15499 205 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TJP3O95049 919 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MAP3K6O95382 1288 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CFBP00751 764 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 FAM163BP0C2L3 166 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 BGNP21810 368 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CETN2P41208 172 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SLC19A1P41440 591 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 HIRAP54198 1017 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ATXN3P54252 364 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 YARSP54577 528 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MRPS35P82673 323 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 DEUP1Q05D60 604 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 PDIA2Q13087 525 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TFDP1Q14186 410 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RASA3Q14644 834 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SEPT2Q15019 361 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SLC5A9Q2M3M2 681 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TSNAXIP1Q2TAA8 658 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 EML3Q32P44 896 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CNPY1Q3B7I2 92 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CFAP157Q5JU67 520 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 C1orf186Q6ZWK4 172 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RAPH1Q70E73 1250 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF720Q7Z2F6 126 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ARHGAP22Q7Z5H3 698 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TCP10LQ8TDR4 215 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TAS1R2Q8TE23 839 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 PYDC1Q8WXC3 89 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TTC17Q96AE7 1141 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RBM41Q96IZ5 413 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MMP19Q99542 508 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 NMUR2Q9GZQ4 415 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 STMN4Q9H169 189 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 TAOK3Q9H2K8 898 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 EBF3Q9H4W6 596 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ACSS2Q9NR19 701 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ARHGEF4Q9NR80 690 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CLIC5Q9NZA1 410 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 FRMD4BQ9Y2L6 1034 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 DAGLAQ9Y4D2 1042 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ANKRD36CQ5JPF3 1778 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MAST2Q6P0Q8 1798 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SPATA31A1Q5TZJ5 1347 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SPATA31A6Q5VVP1 1343 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MROH7Q68CQ1 1323 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ADGRA3Q8IWK6 1321 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 IRS2Q9Y4H2 1338 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ITGB4P16144 1822 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 KAT6AQ92794 2004 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 E2F8A0AVK6 867 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CYB561D2O14569 222 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SLC16A4O15374 487 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 HNRNPRO43390 633 aaKnown RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CDH16O75309 829 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ZMPSTE24O75844 475 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 PSMG1O95456 288 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 NPTXRO95502 500 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ARP10275 920 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 PTPN4P29074 926 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 MAPK4P31152 587 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 SHMT1P34896 483 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 VHLP40337 213 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 WNT7BP56706 349 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 GPX6P59796 221 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ZBTB16Q05516 673 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 BTKQ06187 659 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 GPS1Q13098 491 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 GK3PQ14409 553 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CYP1B1Q16678 543 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 HSF5Q4G112 596 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 PPP6R3Q5H9R7 873 aaPredicted RBP5.72□□□□□ -1.49
ATG4A-204ENST00000372246 C11orf63Q6NUN7 778 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC174Q6PII3 467 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 RNF111Q6ZNA4 994 aa5.72□□□□□ -1.49
ATG4A-204ENST00000372246 ZCCHC23Q6ZST2 131 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms