RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 CTXN3Q4LDR2 81 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 PDE12Q6L8Q7 609 aaKnown RBP17.49■□□□□ 0.39
TMEM53-203ENST00000372242 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 OSTM1Q86WC4 334 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 METTL23Q86XA0 190 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 RTP3Q9BQQ7 232 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 CLSTN3Q9BQT9 956 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 NIF3L1Q9GZT8 377 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 DSEQ9UL01 958 aa17.49■□□□□ 0.39
TMEM53-203ENST00000372242 EYSQ5T1H1 3165 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 PRRC2BQ5JSZ5 2229 aaKnown RBP17.48■□□□□ 0.39
TMEM53-203ENST00000372242 ARHGEF37A1IGU5 675 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 GTPBP10A4D1E9 387 aaKnown RBP17.48■□□□□ 0.39
TMEM53-203ENST00000372242 TEX28O15482 410 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 P4HA1P13674 534 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 FANCCQ00597 558 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 UBXN1Q04323 297 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 KCNMA1Q12791 1236 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 PTPN21Q16825 1174 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 ARHGEF19Q8IW93 802 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 MICALL1Q8N3F8 863 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 BCO2Q9BYV7 579 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 MTRRQ9UBK8 725 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 FBXL5Q9UKA1 691 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 SSX2IPQ9Y2D8 614 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 CDY1Q9Y6F8 540 aa17.48■□□□□ 0.39
TMEM53-203ENST00000372242 TEX33O43247 280 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 OR4Q2P0C623 313 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 ACAT1P24752 427 aaKnown RBP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 LMO2P25791 158 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 OR1D2P34982 312 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 GTF2F1P35269 517 aaKnown RBP eCLIP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 KLK7P49862 253 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 ARPP19P56211 112 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 FKBP15Q5T1M5 1219 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 ZNF280DQ6N043 979 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 GJB7Q6PEY0 223 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 RRAGAQ7L523 313 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 TMEM86AQ8N2M4 240 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 PPM1KQ8N3J5 372 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 KAT5Q92993 513 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 KLHL5Q96PQ7 755 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 DDX43Q9NXZ2 648 aaKnown RBP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 LMCD1Q9NZU5 365 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 NME7Q9Y5B8 376 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 H7C4K7 107 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 GABRDO14764 452 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 TACC1O75410 805 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 PDGFRBP09619 1106 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 CD58P19256 250 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 POU3F3P20264 500 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 NRIP1P48552 1158 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 TCEAL5Q5H9L2 206 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 GPR65Q8IYL9 337 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 OR6B3Q8NGW1 331 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 OR10T2Q8NGX3 314 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 SNX25Q9H3E2 840 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 NSUN3Q9H649 340 aaKnown RBP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 TLE6Q9H808 572 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.47■□□□□ 0.39
TMEM53-203ENST00000372242 FNIP2Q9P278 1114 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 BACE2Q9Y5Z0 518 aa17.47■□□□□ 0.39
TMEM53-203ENST00000372242 FOSL2P15408 326 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 WARSP23381 471 aaKnown RBP17.46■□□□□ 0.39
TMEM53-203ENST00000372242 KLRC2P26717 231 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 GNL1P36915 607 aaPredicted RBP17.46■□□□□ 0.39
TMEM53-203ENST00000372242 LHX1P48742 406 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 CUL2Q13617 745 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 PALB2Q86YC2 1186 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 EMILIN2Q9BXX0 1053 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 IGFLR1Q9H665 355 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 SIX2Q9NPC8 291 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 HMGXB4Q9UGU5 601 aa17.46■□□□□ 0.39
TMEM53-203ENST00000372242 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 NDUFV1P49821 464 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 UBASH3AP57075 661 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 RBM10P98175 930 aaKnown RBP17.45■□□□□ 0.38
TMEM53-203ENST00000372242 ORC1Q13415 861 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 SYCP1Q15431 976 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 DPY19L2P1Q6NXN4 242 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 LSM14BQ9BX40 385 aaKnown RBP17.45■□□□□ 0.38
TMEM53-203ENST00000372242 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
TMEM53-203ENST00000372242 IFNKQ9P0W0 207 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 APEX2Q9UBZ4 518 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
TMEM53-203ENST00000372242 A8MXQ7 604 aa17.44■□□□□ 0.38
TMEM53-203ENST00000372242 ATP2C2O75185 946 aa17.44■□□□□ 0.38
TMEM53-203ENST00000372242 ADH1AP07327 375 aa17.44■□□□□ 0.38
TMEM53-203ENST00000372242 PSMC1P62191 440 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms